Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rif1Q6PR54 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rif1Q6PR54 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rif1Q6PR54 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Rif1Q6PR54 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rif1Q6PR54 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rif1Q6PR54 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.12
Rif1Q6PR54 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rif1Q6PR54 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Rif1Q6PR54 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC15.83■□□□□ 0.12
Rif1Q6PR54 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Rif1Q6PR54 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Rif1Q6PR54 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Rif1Q6PR54 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rif1Q6PR54 AC153962.1-201ENSMUST00000218530 1948 ntBASIC15.82■□□□□ 0.12
Rif1Q6PR54 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rif1Q6PR54 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Rif1Q6PR54 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rif1Q6PR54 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rif1Q6PR54 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Rif1Q6PR54 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Rif1Q6PR54 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC15.82■□□□□ 0.12
Rif1Q6PR54 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rif1Q6PR54 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Rif1Q6PR54 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC15.81■□□□□ 0.12
Rif1Q6PR54 Mir6236-201ENSMUST00000184437 123 ntBASIC15.81■□□□□ 0.12
Rif1Q6PR54 Wnt10b-205ENSMUST00000226846 1204 ntBASIC15.81■□□□□ 0.12
Rif1Q6PR54 Otx2os1-204ENSMUST00000227221 751 ntBASIC15.81■□□□□ 0.12
Rif1Q6PR54 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rif1Q6PR54 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Rif1Q6PR54 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rif1Q6PR54 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Rif1Q6PR54 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rif1Q6PR54 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rif1Q6PR54 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rif1Q6PR54 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rif1Q6PR54 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rif1Q6PR54 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rif1Q6PR54 AC134329.2-201ENSMUST00000217897 428 ntBASIC15.8■□□□□ 0.12
Rif1Q6PR54 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Rif1Q6PR54 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rif1Q6PR54 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rif1Q6PR54 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Rif1Q6PR54 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rif1Q6PR54 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Rif1Q6PR54 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rif1Q6PR54 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rif1Q6PR54 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Rif1Q6PR54 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rif1Q6PR54 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC15.8■□□□□ 0.12
Rif1Q6PR54 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rif1Q6PR54 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rif1Q6PR54 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rif1Q6PR54 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rif1Q6PR54 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rif1Q6PR54 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rif1Q6PR54 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rif1Q6PR54 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rif1Q6PR54 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Rif1Q6PR54 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rif1Q6PR54 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rif1Q6PR54 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rif1Q6PR54 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rif1Q6PR54 Gm22697-201ENSMUST00000175194 63 ntBASIC15.79■□□□□ 0.12
Rif1Q6PR54 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rif1Q6PR54 AC159093.1-201ENSMUST00000227779 380 ntBASIC15.79■□□□□ 0.12
Rif1Q6PR54 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rif1Q6PR54 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC15.79■□□□□ 0.12
Rif1Q6PR54 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rif1Q6PR54 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rif1Q6PR54 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rif1Q6PR54 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC15.78■□□□□ 0.12
Rif1Q6PR54 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rif1Q6PR54 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rif1Q6PR54 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Rif1Q6PR54 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rif1Q6PR54 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Rif1Q6PR54 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rif1Q6PR54 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Rif1Q6PR54 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC15.78■□□□□ 0.12
Rif1Q6PR54 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC15.78■□□□□ 0.12
Rif1Q6PR54 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
Rif1Q6PR54 Gm8258-201ENSMUST00000055593 1449 ntBASIC15.78■□□□□ 0.12
Rif1Q6PR54 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rif1Q6PR54 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rif1Q6PR54 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rif1Q6PR54 AC164883.3-201ENSMUST00000227396 1774 ntBASIC15.78■□□□□ 0.12
Rif1Q6PR54 Gm5587-201ENSMUST00000206270 674 ntBASIC15.77■□□□□ 0.12
Rif1Q6PR54 AC164629.2-201ENSMUST00000217916 270 ntBASIC15.77■□□□□ 0.12
Rif1Q6PR54 Gm18025-201ENSMUST00000221733 862 ntBASIC15.77■□□□□ 0.12
Rif1Q6PR54 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rif1Q6PR54 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rif1Q6PR54 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Rif1Q6PR54 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Rif1Q6PR54 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rif1Q6PR54 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Rif1Q6PR54 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Rif1Q6PR54 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Rif1Q6PR54 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rif1Q6PR54 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC15.77■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms