Protein–RNA interactions for Protein: Q61009

Scarb1, Scavenger receptor class B member 1, mousemouse

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarb1Q61009 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC15.8■□□□□ 0.12
Scarb1Q61009 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Scarb1Q61009 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Scarb1Q61009 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Scarb1Q61009 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Scarb1Q61009 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
Scarb1Q61009 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Scarb1Q61009 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Scarb1Q61009 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Scarb1Q61009 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Scarb1Q61009 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Scarb1Q61009 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Scarb1Q61009 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Scarb1Q61009 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Scarb1Q61009 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Scarb1Q61009 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Scarb1Q61009 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Scarb1Q61009 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Scarb1Q61009 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Scarb1Q61009 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Scarb1Q61009 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Scarb1Q61009 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Scarb1Q61009 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Scarb1Q61009 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Scarb1Q61009 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC15.78■□□□□ 0.12
Scarb1Q61009 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Scarb1Q61009 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Scarb1Q61009 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Scarb1Q61009 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC15.78■□□□□ 0.12
Scarb1Q61009 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Scarb1Q61009 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Scarb1Q61009 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Scarb1Q61009 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Scarb1Q61009 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Scarb1Q61009 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Scarb1Q61009 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
Scarb1Q61009 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Scarb1Q61009 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Scarb1Q61009 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Scarb1Q61009 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Scarb1Q61009 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Scarb1Q61009 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Scarb1Q61009 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Scarb1Q61009 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Scarb1Q61009 Fst-202ENSMUST00000223640 2612 ntBASIC15.77■□□□□ 0.12
Scarb1Q61009 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Scarb1Q61009 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Scarb1Q61009 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Scarb1Q61009 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Scarb1Q61009 Gm15820-201ENSMUST00000201566 728 ntBASIC15.77■□□□□ 0.12
Scarb1Q61009 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC15.77■□□□□ 0.12
Scarb1Q61009 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Scarb1Q61009 Gm37352-201ENSMUST00000193908 2181 ntBASIC15.77■□□□□ 0.11
Scarb1Q61009 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Scarb1Q61009 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Scarb1Q61009 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Scarb1Q61009 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Scarb1Q61009 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Scarb1Q61009 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Scarb1Q61009 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Scarb1Q61009 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Scarb1Q61009 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Scarb1Q61009 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Scarb1Q61009 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Scarb1Q61009 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Scarb1Q61009 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Scarb1Q61009 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Scarb1Q61009 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Scarb1Q61009 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Scarb1Q61009 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC15.76■□□□□ 0.11
Scarb1Q61009 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Scarb1Q61009 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Scarb1Q61009 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Scarb1Q61009 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Scarb1Q61009 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Scarb1Q61009 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Scarb1Q61009 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Scarb1Q61009 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Scarb1Q61009 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC15.75■□□□□ 0.11
Scarb1Q61009 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Scarb1Q61009 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Scarb1Q61009 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Scarb1Q61009 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Scarb1Q61009 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Scarb1Q61009 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Scarb1Q61009 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Scarb1Q61009 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Scarb1Q61009 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Scarb1Q61009 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Scarb1Q61009 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Scarb1Q61009 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Scarb1Q61009 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Scarb1Q61009 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC15.74■□□□□ 0.11
Scarb1Q61009 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Scarb1Q61009 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Scarb1Q61009 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Scarb1Q61009 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Scarb1Q61009 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Scarb1Q61009 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Scarb1Q61009 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms