Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Tnfaip3Q60769 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tnfaip3Q60769 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tnfaip3Q60769 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tnfaip3Q60769 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tnfaip3Q60769 Gm5297-201ENSMUST00000198555 1171 ntBASIC17.58■□□□□ 0.4
Tnfaip3Q60769 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Tnfaip3Q60769 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tnfaip3Q60769 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tnfaip3Q60769 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tnfaip3Q60769 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Tnfaip3Q60769 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Tnfaip3Q60769 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tnfaip3Q60769 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tnfaip3Q60769 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tnfaip3Q60769 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tnfaip3Q60769 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
Tnfaip3Q60769 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tnfaip3Q60769 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tnfaip3Q60769 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tnfaip3Q60769 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tnfaip3Q60769 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Tnfaip3Q60769 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Tnfaip3Q60769 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Tnfaip3Q60769 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.57■□□□□ 0.4
Tnfaip3Q60769 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tnfaip3Q60769 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Tnfaip3Q60769 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Tnfaip3Q60769 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Tnfaip3Q60769 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tnfaip3Q60769 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC17.56■□□□□ 0.4
Tnfaip3Q60769 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.56■□□□□ 0.4
Tnfaip3Q60769 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.56■□□□□ 0.4
Tnfaip3Q60769 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tnfaip3Q60769 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tnfaip3Q60769 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tnfaip3Q60769 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Tnfaip3Q60769 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tnfaip3Q60769 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tnfaip3Q60769 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tnfaip3Q60769 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tnfaip3Q60769 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Tnfaip3Q60769 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Tnfaip3Q60769 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tnfaip3Q60769 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tnfaip3Q60769 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.55■□□□□ 0.4
Tnfaip3Q60769 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC17.55■□□□□ 0.4
Tnfaip3Q60769 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tnfaip3Q60769 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tnfaip3Q60769 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Tnfaip3Q60769 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tnfaip3Q60769 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Tnfaip3Q60769 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.55■□□□□ 0.4
Tnfaip3Q60769 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tnfaip3Q60769 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tnfaip3Q60769 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tnfaip3Q60769 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tnfaip3Q60769 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tnfaip3Q60769 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tnfaip3Q60769 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.54■□□□□ 0.4
Tnfaip3Q60769 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tnfaip3Q60769 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.54■□□□□ 0.4
Tnfaip3Q60769 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tnfaip3Q60769 Gm6211-202ENSMUST00000167849 925 ntBASIC17.54■□□□□ 0.4
Tnfaip3Q60769 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tnfaip3Q60769 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
Tnfaip3Q60769 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tnfaip3Q60769 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tnfaip3Q60769 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tnfaip3Q60769 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Tnfaip3Q60769 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Tnfaip3Q60769 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tnfaip3Q60769 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tnfaip3Q60769 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Tnfaip3Q60769 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tnfaip3Q60769 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Tnfaip3Q60769 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.53■□□□□ 0.4
Tnfaip3Q60769 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tnfaip3Q60769 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tnfaip3Q60769 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tnfaip3Q60769 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Tnfaip3Q60769 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tnfaip3Q60769 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tnfaip3Q60769 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tnfaip3Q60769 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tnfaip3Q60769 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tnfaip3Q60769 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Tnfaip3Q60769 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Tnfaip3Q60769 Gm13148-201ENSMUST00000118892 745 ntBASIC17.52■□□□□ 0.4
Tnfaip3Q60769 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC17.52■□□□□ 0.4
Tnfaip3Q60769 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC17.52■□□□□ 0.4
Tnfaip3Q60769 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.52■□□□□ 0.4
Tnfaip3Q60769 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Tnfaip3Q60769 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tnfaip3Q60769 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tnfaip3Q60769 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Tnfaip3Q60769 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Tnfaip3Q60769 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Tnfaip3Q60769 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Tnfaip3Q60769 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms