Protein–RNA interactions for Protein: Q53EL6

PDCD4, Programmed cell death protein 4, humanhuman

Known RBP Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4Q53EL6 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
PDCD4Q53EL6 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.41■□□□□ 0.86
PDCD4Q53EL6 AL391422.3-201ENST00000603791 2761 ntBASIC20.4■□□□□ 0.86
PDCD4Q53EL6 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PDCD4Q53EL6 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PDCD4Q53EL6 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PDCD4Q53EL6 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PDCD4Q53EL6 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PDCD4Q53EL6 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
PDCD4Q53EL6 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PDCD4Q53EL6 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PDCD4Q53EL6 MIR3621-201ENST00000580529 85 ntBASIC20.4■□□□□ 0.86
PDCD4Q53EL6 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
PDCD4Q53EL6 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
PDCD4Q53EL6 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.4■□□□□ 0.86
PDCD4Q53EL6 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
PDCD4Q53EL6 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.39■□□□□ 0.86
PDCD4Q53EL6 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PDCD4Q53EL6 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.39■□□□□ 0.86
PDCD4Q53EL6 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
PDCD4Q53EL6 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
PDCD4Q53EL6 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
PDCD4Q53EL6 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.39■□□□□ 0.85
PDCD4Q53EL6 AC010525.1-201ENST00000585559 441 ntBASIC20.39■□□□□ 0.85
PDCD4Q53EL6 AC092171.4-201ENST00000609130 632 ntBASIC20.39■□□□□ 0.85
PDCD4Q53EL6 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.39■□□□□ 0.85
PDCD4Q53EL6 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PDCD4Q53EL6 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PDCD4Q53EL6 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PDCD4Q53EL6 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
PDCD4Q53EL6 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
PDCD4Q53EL6 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PDCD4Q53EL6 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
PDCD4Q53EL6 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PDCD4Q53EL6 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
PDCD4Q53EL6 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.38■□□□□ 0.85
PDCD4Q53EL6 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PDCD4Q53EL6 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.38■□□□□ 0.85
PDCD4Q53EL6 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.38■□□□□ 0.85
PDCD4Q53EL6 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
PDCD4Q53EL6 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PDCD4Q53EL6 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PDCD4Q53EL6 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PDCD4Q53EL6 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
PDCD4Q53EL6 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PDCD4Q53EL6 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PDCD4Q53EL6 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.37■□□□□ 0.85
PDCD4Q53EL6 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.37■□□□□ 0.85
PDCD4Q53EL6 SRD5A1P1-201ENST00000442297 786 ntBASIC20.37■□□□□ 0.85
PDCD4Q53EL6 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.37■□□□□ 0.85
PDCD4Q53EL6 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
PDCD4Q53EL6 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.37■□□□□ 0.85
PDCD4Q53EL6 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PDCD4Q53EL6 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PDCD4Q53EL6 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PDCD4Q53EL6 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PDCD4Q53EL6 AL049796.1-201ENST00000565336 1766 ntBASIC20.36■□□□□ 0.85
PDCD4Q53EL6 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PDCD4Q53EL6 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.36■□□□□ 0.85
PDCD4Q53EL6 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PDCD4Q53EL6 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PDCD4Q53EL6 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PDCD4Q53EL6 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
PDCD4Q53EL6 LINC01521-201ENST00000504184 1943 ntBASIC20.36■□□□□ 0.85
PDCD4Q53EL6 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.36■□□□□ 0.85
PDCD4Q53EL6 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.36■□□□□ 0.85
PDCD4Q53EL6 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PDCD4Q53EL6 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
PDCD4Q53EL6 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
PDCD4Q53EL6 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
PDCD4Q53EL6 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PDCD4Q53EL6 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PDCD4Q53EL6 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PDCD4Q53EL6 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PDCD4Q53EL6 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.36■□□□□ 0.85
PDCD4Q53EL6 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
PDCD4Q53EL6 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
PDCD4Q53EL6 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PDCD4Q53EL6 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PDCD4Q53EL6 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
PDCD4Q53EL6 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PDCD4Q53EL6 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PDCD4Q53EL6 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.35■□□□□ 0.85
PDCD4Q53EL6 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.35■□□□□ 0.85
PDCD4Q53EL6 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
PDCD4Q53EL6 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PDCD4Q53EL6 AC003102.1-202ENST00000563394 1796 ntBASIC20.35■□□□□ 0.85
PDCD4Q53EL6 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.35■□□□□ 0.85
PDCD4Q53EL6 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PDCD4Q53EL6 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PDCD4Q53EL6 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.35■□□□□ 0.85
PDCD4Q53EL6 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.35■□□□□ 0.85
PDCD4Q53EL6 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
PDCD4Q53EL6 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
PDCD4Q53EL6 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PDCD4Q53EL6 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PDCD4Q53EL6 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PDCD4Q53EL6 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PDCD4Q53EL6 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PDCD4Q53EL6 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms