Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cks1brtQ3UNC9 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cks1brtQ3UNC9 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cks1brtQ3UNC9 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cks1brtQ3UNC9 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cks1brtQ3UNC9 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Cks1brtQ3UNC9 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Cks1brtQ3UNC9 Rncr4-201ENSMUST00000194541 2234 ntBASIC13.59□□□□□ -0.23
Cks1brtQ3UNC9 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cks1brtQ3UNC9 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cks1brtQ3UNC9 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cks1brtQ3UNC9 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cks1brtQ3UNC9 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cks1brtQ3UNC9 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC13.59□□□□□ -0.23
Cks1brtQ3UNC9 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC13.59□□□□□ -0.23
Cks1brtQ3UNC9 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC13.59□□□□□ -0.23
Cks1brtQ3UNC9 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cks1brtQ3UNC9 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cks1brtQ3UNC9 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cks1brtQ3UNC9 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cks1brtQ3UNC9 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cks1brtQ3UNC9 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Cks1brtQ3UNC9 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cks1brtQ3UNC9 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cks1brtQ3UNC9 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Cks1brtQ3UNC9 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cks1brtQ3UNC9 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cks1brtQ3UNC9 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cks1brtQ3UNC9 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Cks1brtQ3UNC9 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cks1brtQ3UNC9 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cks1brtQ3UNC9 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cks1brtQ3UNC9 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cks1brtQ3UNC9 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC13.58□□□□□ -0.24
Cks1brtQ3UNC9 AC167019.3-201ENSMUST00000228225 1266 ntBASIC13.58□□□□□ -0.24
Cks1brtQ3UNC9 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cks1brtQ3UNC9 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC13.58□□□□□ -0.24
Cks1brtQ3UNC9 BC021767-201ENSMUST00000126387 1716 ntBASIC13.58□□□□□ -0.24
Cks1brtQ3UNC9 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cks1brtQ3UNC9 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cks1brtQ3UNC9 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cks1brtQ3UNC9 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Cks1brtQ3UNC9 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cks1brtQ3UNC9 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cks1brtQ3UNC9 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cks1brtQ3UNC9 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cks1brtQ3UNC9 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cks1brtQ3UNC9 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cks1brtQ3UNC9 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Cks1brtQ3UNC9 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cks1brtQ3UNC9 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cks1brtQ3UNC9 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cks1brtQ3UNC9 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Cks1brtQ3UNC9 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cks1brtQ3UNC9 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cks1brtQ3UNC9 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Cks1brtQ3UNC9 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cks1brtQ3UNC9 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cks1brtQ3UNC9 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Cks1brtQ3UNC9 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cks1brtQ3UNC9 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC13.56□□□□□ -0.24
Cks1brtQ3UNC9 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cks1brtQ3UNC9 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cks1brtQ3UNC9 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cks1brtQ3UNC9 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cks1brtQ3UNC9 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cks1brtQ3UNC9 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cks1brtQ3UNC9 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC13.56□□□□□ -0.24
Cks1brtQ3UNC9 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC13.56□□□□□ -0.24
Cks1brtQ3UNC9 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cks1brtQ3UNC9 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cks1brtQ3UNC9 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cks1brtQ3UNC9 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cks1brtQ3UNC9 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Cks1brtQ3UNC9 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cks1brtQ3UNC9 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cks1brtQ3UNC9 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cks1brtQ3UNC9 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC13.56□□□□□ -0.24
Cks1brtQ3UNC9 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC13.56□□□□□ -0.24
Cks1brtQ3UNC9 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cks1brtQ3UNC9 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cks1brtQ3UNC9 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cks1brtQ3UNC9 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cks1brtQ3UNC9 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cks1brtQ3UNC9 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cks1brtQ3UNC9 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cks1brtQ3UNC9 Gm37811-201ENSMUST00000192416 2601 ntBASIC13.55□□□□□ -0.24
Cks1brtQ3UNC9 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cks1brtQ3UNC9 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cks1brtQ3UNC9 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cks1brtQ3UNC9 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC13.55□□□□□ -0.24
Cks1brtQ3UNC9 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cks1brtQ3UNC9 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cks1brtQ3UNC9 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cks1brtQ3UNC9 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cks1brtQ3UNC9 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC13.55□□□□□ -0.24
Cks1brtQ3UNC9 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cks1brtQ3UNC9 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cks1brtQ3UNC9 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cks1brtQ3UNC9 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms