Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Six5P70178 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Six5P70178 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.52■□□□□ 0.4
Six5P70178 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Six5P70178 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Six5P70178 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Six5P70178 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Six5P70178 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Six5P70178 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC17.52■□□□□ 0.4
Six5P70178 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Six5P70178 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Six5P70178 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Six5P70178 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Six5P70178 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Six5P70178 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Six5P70178 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Six5P70178 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Six5P70178 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Six5P70178 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Six5P70178 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Six5P70178 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Six5P70178 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.51■□□□□ 0.39
Six5P70178 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Six5P70178 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Six5P70178 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Six5P70178 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.51■□□□□ 0.39
Six5P70178 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Six5P70178 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Six5P70178 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Six5P70178 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Six5P70178 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Six5P70178 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Six5P70178 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Six5P70178 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Six5P70178 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Six5P70178 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Six5P70178 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Six5P70178 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Six5P70178 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
Six5P70178 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Six5P70178 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.5■□□□□ 0.39
Six5P70178 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC17.5■□□□□ 0.39
Six5P70178 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Six5P70178 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Six5P70178 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
Six5P70178 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Six5P70178 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Six5P70178 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Six5P70178 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.5■□□□□ 0.39
Six5P70178 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.5■□□□□ 0.39
Six5P70178 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Six5P70178 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Six5P70178 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Six5P70178 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Six5P70178 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Six5P70178 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Six5P70178 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Six5P70178 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Six5P70178 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Six5P70178 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Six5P70178 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.49■□□□□ 0.39
Six5P70178 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.49■□□□□ 0.39
Six5P70178 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC17.49■□□□□ 0.39
Six5P70178 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Six5P70178 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Six5P70178 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Six5P70178 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Six5P70178 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Six5P70178 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Six5P70178 BC021767-201ENSMUST00000126387 1716 ntBASIC17.48■□□□□ 0.39
Six5P70178 Gm10849-201ENSMUST00000100397 618 ntBASIC17.48■□□□□ 0.39
Six5P70178 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Six5P70178 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Six5P70178 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.48■□□□□ 0.39
Six5P70178 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Six5P70178 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.48■□□□□ 0.39
Six5P70178 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Six5P70178 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Six5P70178 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Six5P70178 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Six5P70178 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Six5P70178 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
Six5P70178 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Six5P70178 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.47■□□□□ 0.39
Six5P70178 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Six5P70178 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Six5P70178 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Six5P70178 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.47■□□□□ 0.39
Six5P70178 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Six5P70178 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Six5P70178 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Six5P70178 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Six5P70178 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Six5P70178 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Six5P70178 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Six5P70178 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Six5P70178 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Six5P70178 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Six5P70178 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Six5P70178 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms