Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Lhx3P50481 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Lhx3P50481 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Lhx3P50481 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Lhx3P50481 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Lhx3P50481 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Lhx3P50481 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Lhx3P50481 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC19.07■□□□□ 0.64
Lhx3P50481 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Lhx3P50481 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Lhx3P50481 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Lhx3P50481 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Lhx3P50481 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.07■□□□□ 0.64
Lhx3P50481 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Lhx3P50481 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Lhx3P50481 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Lhx3P50481 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Lhx3P50481 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Lhx3P50481 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Lhx3P50481 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Lhx3P50481 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Lhx3P50481 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.06■□□□□ 0.64
Lhx3P50481 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Lhx3P50481 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Lhx3P50481 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Lhx3P50481 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Lhx3P50481 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Lhx3P50481 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Lhx3P50481 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Lhx3P50481 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Lhx3P50481 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Lhx3P50481 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Lhx3P50481 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Lhx3P50481 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Lhx3P50481 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Lhx3P50481 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Lhx3P50481 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.05■□□□□ 0.64
Lhx3P50481 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Lhx3P50481 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Lhx3P50481 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Lhx3P50481 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Lhx3P50481 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lhx3P50481 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lhx3P50481 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
Lhx3P50481 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Lhx3P50481 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lhx3P50481 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lhx3P50481 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lhx3P50481 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lhx3P50481 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lhx3P50481 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Lhx3P50481 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Lhx3P50481 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lhx3P50481 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Lhx3P50481 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Lhx3P50481 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Lhx3P50481 BC021767-201ENSMUST00000126387 1716 ntBASIC19.03■□□□□ 0.64
Lhx3P50481 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Lhx3P50481 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lhx3P50481 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Lhx3P50481 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lhx3P50481 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lhx3P50481 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lhx3P50481 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lhx3P50481 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lhx3P50481 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lhx3P50481 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Lhx3P50481 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lhx3P50481 Gm43672-201ENSMUST00000199072 1731 ntBASIC19.03■□□□□ 0.64
Lhx3P50481 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lhx3P50481 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Lhx3P50481 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Lhx3P50481 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Lhx3P50481 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Lhx3P50481 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC19.02■□□□□ 0.64
Lhx3P50481 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Lhx3P50481 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.02■□□□□ 0.64
Lhx3P50481 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Lhx3P50481 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Lhx3P50481 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Lhx3P50481 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Lhx3P50481 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Lhx3P50481 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lhx3P50481 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lhx3P50481 Gm37563-201ENSMUST00000192580 1513 ntBASIC19.01■□□□□ 0.63
Lhx3P50481 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lhx3P50481 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Lhx3P50481 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lhx3P50481 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lhx3P50481 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Lhx3P50481 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Lhx3P50481 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lhx3P50481 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
Lhx3P50481 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.01■□□□□ 0.63
Lhx3P50481 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Lhx3P50481 Gm13509-201ENSMUST00000119733 1308 ntBASIC19■□□□□ 0.63
Lhx3P50481 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Lhx3P50481 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
Lhx3P50481 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Lhx3P50481 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms