Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nkx2-2P42586 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nkx2-2P42586 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.25■□□□□ 0.35
Nkx2-2P42586 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.25■□□□□ 0.35
Nkx2-2P42586 Gm42642-201ENSMUST00000200683 355 ntBASIC17.25■□□□□ 0.35
Nkx2-2P42586 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nkx2-2P42586 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nkx2-2P42586 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nkx2-2P42586 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Nkx2-2P42586 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nkx2-2P42586 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nkx2-2P42586 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.24■□□□□ 0.35
Nkx2-2P42586 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nkx2-2P42586 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.24■□□□□ 0.35
Nkx2-2P42586 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.24■□□□□ 0.35
Nkx2-2P42586 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.24■□□□□ 0.35
Nkx2-2P42586 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nkx2-2P42586 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nkx2-2P42586 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nkx2-2P42586 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nkx2-2P42586 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nkx2-2P42586 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Nkx2-2P42586 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nkx2-2P42586 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nkx2-2P42586 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
Nkx2-2P42586 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nkx2-2P42586 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Nkx2-2P42586 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nkx2-2P42586 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Nkx2-2P42586 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nkx2-2P42586 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Nkx2-2P42586 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
Nkx2-2P42586 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nkx2-2P42586 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nkx2-2P42586 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nkx2-2P42586 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Nkx2-2P42586 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC17.22■□□□□ 0.35
Nkx2-2P42586 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.22■□□□□ 0.35
Nkx2-2P42586 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Nkx2-2P42586 Gm18671-201ENSMUST00000214826 683 ntBASIC17.22■□□□□ 0.35
Nkx2-2P42586 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nkx2-2P42586 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nkx2-2P42586 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nkx2-2P42586 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nkx2-2P42586 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Nkx2-2P42586 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.21■□□□□ 0.35
Nkx2-2P42586 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Nkx2-2P42586 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nkx2-2P42586 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Nkx2-2P42586 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nkx2-2P42586 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nkx2-2P42586 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nkx2-2P42586 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.21■□□□□ 0.35
Nkx2-2P42586 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC17.21■□□□□ 0.35
Nkx2-2P42586 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nkx2-2P42586 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.21■□□□□ 0.35
Nkx2-2P42586 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nkx2-2P42586 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nkx2-2P42586 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nkx2-2P42586 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
Nkx2-2P42586 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.21■□□□□ 0.34
Nkx2-2P42586 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Nkx2-2P42586 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Nkx2-2P42586 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.2■□□□□ 0.34
Nkx2-2P42586 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
Nkx2-2P42586 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Nkx2-2P42586 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.2■□□□□ 0.34
Nkx2-2P42586 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.2■□□□□ 0.34
Nkx2-2P42586 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.2■□□□□ 0.34
Nkx2-2P42586 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nkx2-2P42586 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Nkx2-2P42586 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nkx2-2P42586 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nkx2-2P42586 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nkx2-2P42586 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nkx2-2P42586 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.19■□□□□ 0.34
Nkx2-2P42586 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Nkx2-2P42586 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nkx2-2P42586 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nkx2-2P42586 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Nkx2-2P42586 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nkx2-2P42586 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC17.19■□□□□ 0.34
Nkx2-2P42586 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Nkx2-2P42586 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nkx2-2P42586 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Nkx2-2P42586 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nkx2-2P42586 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nkx2-2P42586 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nkx2-2P42586 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nkx2-2P42586 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.19■□□□□ 0.34
Nkx2-2P42586 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Nkx2-2P42586 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nkx2-2P42586 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nkx2-2P42586 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Nkx2-2P42586 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.18■□□□□ 0.34
Nkx2-2P42586 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nkx2-2P42586 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nkx2-2P42586 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Nkx2-2P42586 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nkx2-2P42586 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms