Protein–RNA interactions for Protein: P39429

Traf2, TNF receptor-associated factor 2, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf2P39429 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Traf2P39429 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Traf2P39429 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Traf2P39429 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Traf2P39429 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.84■□□□□ 0.61
Traf2P39429 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Traf2P39429 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
Traf2P39429 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Traf2P39429 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC18.83■□□□□ 0.6
Traf2P39429 Gm13534-201ENSMUST00000121169 513 ntBASIC18.83■□□□□ 0.6
Traf2P39429 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Traf2P39429 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.83■□□□□ 0.6
Traf2P39429 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Traf2P39429 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
Traf2P39429 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Traf2P39429 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Traf2P39429 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Traf2P39429 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Traf2P39429 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Traf2P39429 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Traf2P39429 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Traf2P39429 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Traf2P39429 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Traf2P39429 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.82■□□□□ 0.6
Traf2P39429 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Traf2P39429 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.82■□□□□ 0.6
Traf2P39429 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Traf2P39429 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Traf2P39429 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
Traf2P39429 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Traf2P39429 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Traf2P39429 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Traf2P39429 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Traf2P39429 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Traf2P39429 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Traf2P39429 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Traf2P39429 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Traf2P39429 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Traf2P39429 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.81■□□□□ 0.6
Traf2P39429 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.81■□□□□ 0.6
Traf2P39429 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Traf2P39429 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Traf2P39429 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Traf2P39429 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.81■□□□□ 0.6
Traf2P39429 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Traf2P39429 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Traf2P39429 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Traf2P39429 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Traf2P39429 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Traf2P39429 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Traf2P39429 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Traf2P39429 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Traf2P39429 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Traf2P39429 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Traf2P39429 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Traf2P39429 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.8■□□□□ 0.6
Traf2P39429 Gm7514-201ENSMUST00000209475 934 ntBASIC18.8■□□□□ 0.6
Traf2P39429 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Traf2P39429 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Traf2P39429 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Traf2P39429 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.8■□□□□ 0.6
Traf2P39429 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Traf2P39429 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Traf2P39429 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Traf2P39429 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Traf2P39429 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Traf2P39429 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.79■□□□□ 0.6
Traf2P39429 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Traf2P39429 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Traf2P39429 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Traf2P39429 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.79■□□□□ 0.6
Traf2P39429 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Traf2P39429 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Traf2P39429 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Traf2P39429 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Traf2P39429 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Traf2P39429 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Traf2P39429 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Traf2P39429 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Traf2P39429 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Traf2P39429 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Traf2P39429 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Traf2P39429 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Traf2P39429 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Traf2P39429 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Traf2P39429 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Traf2P39429 Gm27405-201ENSMUST00000184201 112 ntBASIC18.78■□□□□ 0.6
Traf2P39429 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Traf2P39429 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.78■□□□□ 0.6
Traf2P39429 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.78■□□□□ 0.6
Traf2P39429 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Traf2P39429 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Traf2P39429 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Traf2P39429 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Traf2P39429 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Traf2P39429 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
Traf2P39429 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Traf2P39429 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
Traf2P39429 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Traf2P39429 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms