Protein–RNA interactions for Protein: P35546

Ret, Proto-oncogene tyrosine-protein kinase receptor Ret, mousemouse

Predictions only

Length 1,115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RetP35546 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.51■□□□□ 0.39
RetP35546 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RetP35546 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RetP35546 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.5■□□□□ 0.39
RetP35546 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RetP35546 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.5■□□□□ 0.39
RetP35546 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RetP35546 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RetP35546 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.5■□□□□ 0.39
RetP35546 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
RetP35546 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
RetP35546 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
RetP35546 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RetP35546 Gm3807-201ENSMUST00000193520 1168 ntBASIC17.5■□□□□ 0.39
RetP35546 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.5■□□□□ 0.39
RetP35546 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RetP35546 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
RetP35546 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RetP35546 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RetP35546 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RetP35546 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RetP35546 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RetP35546 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RetP35546 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RetP35546 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RetP35546 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RetP35546 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
RetP35546 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RetP35546 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
RetP35546 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC17.49■□□□□ 0.39
RetP35546 Gm22240-201ENSMUST00000175225 82 ntBASIC17.49■□□□□ 0.39
RetP35546 Gm20760-201ENSMUST00000179197 648 ntBASIC17.49■□□□□ 0.39
RetP35546 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
RetP35546 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RetP35546 Golph3-205ENSMUST00000228671 2842 ntBASIC17.49■□□□□ 0.39
RetP35546 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.49■□□□□ 0.39
RetP35546 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RetP35546 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RetP35546 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RetP35546 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RetP35546 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RetP35546 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RetP35546 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RetP35546 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RetP35546 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RetP35546 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
RetP35546 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
RetP35546 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RetP35546 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RetP35546 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
RetP35546 Gm42555-201ENSMUST00000199304 1039 ntBASIC17.48■□□□□ 0.39
RetP35546 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
RetP35546 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RetP35546 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
RetP35546 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RetP35546 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RetP35546 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RetP35546 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RetP35546 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.47■□□□□ 0.39
RetP35546 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RetP35546 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RetP35546 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RetP35546 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RetP35546 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RetP35546 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
RetP35546 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RetP35546 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RetP35546 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RetP35546 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC17.47■□□□□ 0.39
RetP35546 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
RetP35546 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC17.47■□□□□ 0.39
RetP35546 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RetP35546 Gm4968-201ENSMUST00000071458 858 ntBASIC17.47■□□□□ 0.39
RetP35546 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RetP35546 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RetP35546 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RetP35546 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RetP35546 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RetP35546 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RetP35546 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RetP35546 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
RetP35546 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RetP35546 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
RetP35546 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
RetP35546 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RetP35546 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
RetP35546 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RetP35546 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RetP35546 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RetP35546 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RetP35546 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RetP35546 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
RetP35546 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.46■□□□□ 0.38
RetP35546 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
RetP35546 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
RetP35546 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
RetP35546 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RetP35546 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RetP35546 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RetP35546 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms