Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Col8a2P25318 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col8a2P25318 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col8a2P25318 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col8a2P25318 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col8a2P25318 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Col8a2P25318 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col8a2P25318 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC15.68■□□□□ 0.1
Col8a2P25318 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col8a2P25318 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col8a2P25318 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col8a2P25318 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col8a2P25318 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col8a2P25318 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC15.68■□□□□ 0.1
Col8a2P25318 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
Col8a2P25318 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Col8a2P25318 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC15.68■□□□□ 0.1
Col8a2P25318 Golph3-205ENSMUST00000228671 2842 ntBASIC15.68■□□□□ 0.1
Col8a2P25318 Rncr4-201ENSMUST00000194541 2234 ntBASIC15.68■□□□□ 0.1
Col8a2P25318 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col8a2P25318 AC126028.2-201ENSMUST00000228100 1833 ntBASIC15.68■□□□□ 0.1
Col8a2P25318 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col8a2P25318 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col8a2P25318 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col8a2P25318 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Col8a2P25318 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col8a2P25318 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Col8a2P25318 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col8a2P25318 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col8a2P25318 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col8a2P25318 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC15.67■□□□□ 0.1
Col8a2P25318 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC15.67■□□□□ 0.1
Col8a2P25318 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Col8a2P25318 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col8a2P25318 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col8a2P25318 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col8a2P25318 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col8a2P25318 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col8a2P25318 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col8a2P25318 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col8a2P25318 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col8a2P25318 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col8a2P25318 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col8a2P25318 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col8a2P25318 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col8a2P25318 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Col8a2P25318 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col8a2P25318 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Col8a2P25318 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Col8a2P25318 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Col8a2P25318 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col8a2P25318 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col8a2P25318 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Col8a2P25318 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col8a2P25318 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col8a2P25318 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col8a2P25318 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col8a2P25318 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col8a2P25318 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col8a2P25318 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col8a2P25318 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col8a2P25318 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col8a2P25318 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col8a2P25318 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Col8a2P25318 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col8a2P25318 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Col8a2P25318 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
Col8a2P25318 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col8a2P25318 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Col8a2P25318 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC15.65■□□□□ 0.1
Col8a2P25318 AC112142.1-201ENSMUST00000228796 918 ntBASIC15.65■□□□□ 0.1
Col8a2P25318 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col8a2P25318 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col8a2P25318 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col8a2P25318 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
Col8a2P25318 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col8a2P25318 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Col8a2P25318 Gm37563-201ENSMUST00000192580 1513 ntBASIC15.64■□□□□ 0.09
Col8a2P25318 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Col8a2P25318 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col8a2P25318 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Col8a2P25318 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col8a2P25318 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
Col8a2P25318 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC15.64■□□□□ 0.09
Col8a2P25318 Gm12669-201ENSMUST00000122162 1009 ntBASIC15.64■□□□□ 0.09
Col8a2P25318 Gm6211-202ENSMUST00000167849 925 ntBASIC15.64■□□□□ 0.09
Col8a2P25318 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC15.64■□□□□ 0.09
Col8a2P25318 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Col8a2P25318 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col8a2P25318 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col8a2P25318 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col8a2P25318 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col8a2P25318 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col8a2P25318 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col8a2P25318 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Col8a2P25318 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Col8a2P25318 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC15.63■□□□□ 0.09
Col8a2P25318 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col8a2P25318 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Col8a2P25318 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms