Protein–RNA interactions for Protein: P20309

CHRM3, Muscarinic acetylcholine receptor M3, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRM3P20309 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
CHRM3P20309 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CHRM3P20309 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
CHRM3P20309 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.14■□□□□ 0.97
CHRM3P20309 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CHRM3P20309 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CHRM3P20309 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CHRM3P20309 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHRM3P20309 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.13■□□□□ 0.97
CHRM3P20309 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
CHRM3P20309 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHRM3P20309 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.13■□□□□ 0.97
CHRM3P20309 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHRM3P20309 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHRM3P20309 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHRM3P20309 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC21.13■□□□□ 0.97
CHRM3P20309 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHRM3P20309 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC21.13■□□□□ 0.97
CHRM3P20309 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC21.13■□□□□ 0.97
CHRM3P20309 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CHRM3P20309 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHRM3P20309 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHRM3P20309 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHRM3P20309 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.13■□□□□ 0.97
CHRM3P20309 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CHRM3P20309 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
CHRM3P20309 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHRM3P20309 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHRM3P20309 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
CHRM3P20309 HYI-206ENST00000372434 1025 ntTSL 5 BASIC21.12■□□□□ 0.97
CHRM3P20309 MIR572-201ENST00000384983 95 ntBASIC21.12■□□□□ 0.97
CHRM3P20309 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHRM3P20309 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHRM3P20309 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC21.12■□□□□ 0.97
CHRM3P20309 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC21.12■□□□□ 0.97
CHRM3P20309 AC104564.3-201ENST00000582367 638 ntBASIC21.12■□□□□ 0.97
CHRM3P20309 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC21.12■□□□□ 0.97
CHRM3P20309 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
CHRM3P20309 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.12■□□□□ 0.97
CHRM3P20309 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.12■□□□□ 0.97
CHRM3P20309 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CHRM3P20309 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHRM3P20309 AC244015.2-201ENST00000616358 1861 ntBASIC21.11■□□□□ 0.97
CHRM3P20309 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHRM3P20309 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC21.11■□□□□ 0.97
CHRM3P20309 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHRM3P20309 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHRM3P20309 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CHRM3P20309 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHRM3P20309 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHRM3P20309 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHRM3P20309 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC21.11■□□□□ 0.97
CHRM3P20309 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC21.11■□□□□ 0.97
CHRM3P20309 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHRM3P20309 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CHRM3P20309 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.11■□□□□ 0.97
CHRM3P20309 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHRM3P20309 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHRM3P20309 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CHRM3P20309 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHRM3P20309 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC21.1■□□□□ 0.97
CHRM3P20309 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CHRM3P20309 MTURN-203ENST00000409688 843 ntTSL 2 BASIC21.1■□□□□ 0.97
CHRM3P20309 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC21.1■□□□□ 0.97
CHRM3P20309 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CHRM3P20309 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
CHRM3P20309 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CHRM3P20309 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.1■□□□□ 0.97
CHRM3P20309 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CHRM3P20309 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CHRM3P20309 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CHRM3P20309 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
CHRM3P20309 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
CHRM3P20309 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.09■□□□□ 0.97
CHRM3P20309 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
CHRM3P20309 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
CHRM3P20309 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC21.09■□□□□ 0.97
CHRM3P20309 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.09■□□□□ 0.97
CHRM3P20309 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CHRM3P20309 MIR638-201ENST00000385237 100 ntBASIC21.09■□□□□ 0.97
CHRM3P20309 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CHRM3P20309 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC21.09■□□□□ 0.97
CHRM3P20309 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.09■□□□□ 0.97
CHRM3P20309 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.09■□□□□ 0.97
CHRM3P20309 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.09■□□□□ 0.97
CHRM3P20309 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
CHRM3P20309 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
CHRM3P20309 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CHRM3P20309 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.08■□□□□ 0.97
CHRM3P20309 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CHRM3P20309 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CHRM3P20309 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC21.08■□□□□ 0.97
CHRM3P20309 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC21.08■□□□□ 0.97
CHRM3P20309 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CHRM3P20309 STOX2-205ENST00000513034 807 ntTSL 3 BASIC21.08■□□□□ 0.97
CHRM3P20309 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CHRM3P20309 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.08■□□□□ 0.96
CHRM3P20309 AP006587.3-201ENST00000525742 1516 ntBASIC21.08■□□□□ 0.96
CHRM3P20309 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CHRM3P20309 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.08■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms