Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccl1P10146 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Ccl1P10146 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccl1P10146 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Ccl1P10146 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccl1P10146 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccl1P10146 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccl1P10146 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Ccl1P10146 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
Ccl1P10146 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.07
Ccl1P10146 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Ccl1P10146 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ccl1P10146 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccl1P10146 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC14.58□□□□□ -0.08
Ccl1P10146 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ccl1P10146 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Ccl1P10146 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccl1P10146 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ccl1P10146 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccl1P10146 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Ccl1P10146 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccl1P10146 Gm11175-201ENSMUST00000116172 543 ntBASIC14.57□□□□□ -0.08
Ccl1P10146 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccl1P10146 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccl1P10146 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccl1P10146 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccl1P10146 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ccl1P10146 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccl1P10146 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccl1P10146 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccl1P10146 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccl1P10146 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccl1P10146 Gm37811-201ENSMUST00000192416 2601 ntBASIC14.57□□□□□ -0.08
Ccl1P10146 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccl1P10146 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccl1P10146 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccl1P10146 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccl1P10146 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccl1P10146 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccl1P10146 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccl1P10146 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Ccl1P10146 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccl1P10146 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ccl1P10146 Gm43530-201ENSMUST00000195920 274 ntBASIC14.56□□□□□ -0.08
Ccl1P10146 Gm45444-201ENSMUST00000211394 898 ntBASIC14.56□□□□□ -0.08
Ccl1P10146 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Ccl1P10146 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccl1P10146 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccl1P10146 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccl1P10146 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccl1P10146 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccl1P10146 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Ccl1P10146 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Ccl1P10146 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccl1P10146 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccl1P10146 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccl1P10146 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ccl1P10146 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccl1P10146 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Ccl1P10146 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccl1P10146 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC14.55□□□□□ -0.08
Ccl1P10146 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC14.55□□□□□ -0.08
Ccl1P10146 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ccl1P10146 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Ccl1P10146 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC14.55□□□□□ -0.08
Ccl1P10146 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC14.55□□□□□ -0.08
Ccl1P10146 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccl1P10146 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccl1P10146 Gm19439-201ENSMUST00000198195 2273 ntBASIC14.55□□□□□ -0.08
Ccl1P10146 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccl1P10146 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccl1P10146 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC14.55□□□□□ -0.08
Ccl1P10146 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccl1P10146 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccl1P10146 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccl1P10146 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccl1P10146 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Ccl1P10146 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccl1P10146 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Ccl1P10146 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccl1P10146 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccl1P10146 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Ccl1P10146 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccl1P10146 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccl1P10146 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ccl1P10146 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccl1P10146 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC14.54□□□□□ -0.08
Ccl1P10146 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccl1P10146 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccl1P10146 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccl1P10146 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ccl1P10146 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
Ccl1P10146 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccl1P10146 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccl1P10146 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccl1P10146 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ccl1P10146 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccl1P10146 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccl1P10146 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ccl1P10146 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms