Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC12.96□□□□□ -0.33
Smim1P0C8K7 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC12.96□□□□□ -0.33
Smim1P0C8K7 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Smim1P0C8K7 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Smim1P0C8K7 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
Smim1P0C8K7 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Smim1P0C8K7 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Smim1P0C8K7 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Smim1P0C8K7 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Smim1P0C8K7 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Smim1P0C8K7 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Smim1P0C8K7 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smim1P0C8K7 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smim1P0C8K7 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smim1P0C8K7 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smim1P0C8K7 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smim1P0C8K7 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smim1P0C8K7 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC12.95□□□□□ -0.34
Smim1P0C8K7 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smim1P0C8K7 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
Smim1P0C8K7 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smim1P0C8K7 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smim1P0C8K7 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smim1P0C8K7 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC12.95□□□□□ -0.34
Smim1P0C8K7 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smim1P0C8K7 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
Smim1P0C8K7 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Smim1P0C8K7 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Smim1P0C8K7 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smim1P0C8K7 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smim1P0C8K7 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smim1P0C8K7 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smim1P0C8K7 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Smim1P0C8K7 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smim1P0C8K7 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smim1P0C8K7 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smim1P0C8K7 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC12.94□□□□□ -0.34
Smim1P0C8K7 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smim1P0C8K7 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Smim1P0C8K7 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smim1P0C8K7 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Smim1P0C8K7 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smim1P0C8K7 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smim1P0C8K7 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smim1P0C8K7 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smim1P0C8K7 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Smim1P0C8K7 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Smim1P0C8K7 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smim1P0C8K7 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smim1P0C8K7 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smim1P0C8K7 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smim1P0C8K7 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smim1P0C8K7 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Smim1P0C8K7 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smim1P0C8K7 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smim1P0C8K7 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Smim1P0C8K7 Gm28536-201ENSMUST00000190971 1317 ntBASIC12.93□□□□□ -0.34
Smim1P0C8K7 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Smim1P0C8K7 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC12.93□□□□□ -0.34
Smim1P0C8K7 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smim1P0C8K7 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smim1P0C8K7 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Smim1P0C8K7 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Smim1P0C8K7 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smim1P0C8K7 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Smim1P0C8K7 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smim1P0C8K7 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Smim1P0C8K7 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smim1P0C8K7 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smim1P0C8K7 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Smim1P0C8K7 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smim1P0C8K7 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Smim1P0C8K7 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smim1P0C8K7 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smim1P0C8K7 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smim1P0C8K7 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Smim1P0C8K7 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Smim1P0C8K7 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smim1P0C8K7 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Smim1P0C8K7 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Smim1P0C8K7 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Smim1P0C8K7 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Smim1P0C8K7 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Smim1P0C8K7 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Smim1P0C8K7 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Smim1P0C8K7 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smim1P0C8K7 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smim1P0C8K7 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smim1P0C8K7 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Smim1P0C8K7 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smim1P0C8K7 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smim1P0C8K7 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smim1P0C8K7 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Smim1P0C8K7 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Smim1P0C8K7 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smim1P0C8K7 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC12.91□□□□□ -0.34
Smim1P0C8K7 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smim1P0C8K7 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smim1P0C8K7 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smim1P0C8K7 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms