Protein–RNA interactions for Protein: P0C6B2

Ptcra, Pre T-cell antigen receptor alpha, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtcraP0C6B2 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC16.28■□□□□ 0.2
PtcraP0C6B2 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
PtcraP0C6B2 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
PtcraP0C6B2 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PtcraP0C6B2 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC16.28■□□□□ 0.2
PtcraP0C6B2 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC16.28■□□□□ 0.2
PtcraP0C6B2 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PtcraP0C6B2 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PtcraP0C6B2 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PtcraP0C6B2 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
PtcraP0C6B2 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PtcraP0C6B2 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PtcraP0C6B2 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PtcraP0C6B2 Gm10849-201ENSMUST00000100397 618 ntBASIC16.27■□□□□ 0.2
PtcraP0C6B2 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC16.27■□□□□ 0.2
PtcraP0C6B2 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC16.27■□□□□ 0.2
PtcraP0C6B2 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PtcraP0C6B2 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PtcraP0C6B2 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PtcraP0C6B2 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PtcraP0C6B2 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PtcraP0C6B2 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
PtcraP0C6B2 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
PtcraP0C6B2 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC16.27■□□□□ 0.19
PtcraP0C6B2 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PtcraP0C6B2 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PtcraP0C6B2 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
PtcraP0C6B2 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PtcraP0C6B2 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PtcraP0C6B2 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PtcraP0C6B2 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PtcraP0C6B2 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PtcraP0C6B2 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PtcraP0C6B2 Gm15039-201ENSMUST00000118914 875 ntBASIC16.26■□□□□ 0.19
PtcraP0C6B2 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC16.26■□□□□ 0.19
PtcraP0C6B2 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PtcraP0C6B2 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC16.26■□□□□ 0.19
PtcraP0C6B2 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC16.26■□□□□ 0.19
PtcraP0C6B2 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PtcraP0C6B2 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PtcraP0C6B2 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PtcraP0C6B2 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PtcraP0C6B2 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PtcraP0C6B2 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PtcraP0C6B2 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC16.25■□□□□ 0.19
PtcraP0C6B2 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
PtcraP0C6B2 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PtcraP0C6B2 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC16.25■□□□□ 0.19
PtcraP0C6B2 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
PtcraP0C6B2 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PtcraP0C6B2 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC16.25■□□□□ 0.19
PtcraP0C6B2 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PtcraP0C6B2 AV356131-201ENSMUST00000206201 750 ntBASIC16.25■□□□□ 0.19
PtcraP0C6B2 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PtcraP0C6B2 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PtcraP0C6B2 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PtcraP0C6B2 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PtcraP0C6B2 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PtcraP0C6B2 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PtcraP0C6B2 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
PtcraP0C6B2 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC16.24■□□□□ 0.19
PtcraP0C6B2 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PtcraP0C6B2 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC16.24■□□□□ 0.19
PtcraP0C6B2 Ap3s1-204ENSMUST00000225520 957 ntBASIC16.24■□□□□ 0.19
PtcraP0C6B2 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
PtcraP0C6B2 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
PtcraP0C6B2 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PtcraP0C6B2 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PtcraP0C6B2 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PtcraP0C6B2 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PtcraP0C6B2 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PtcraP0C6B2 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PtcraP0C6B2 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
PtcraP0C6B2 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PtcraP0C6B2 Gm43231-201ENSMUST00000202960 2258 ntBASIC16.24■□□□□ 0.19
PtcraP0C6B2 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PtcraP0C6B2 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
PtcraP0C6B2 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PtcraP0C6B2 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
PtcraP0C6B2 Gm26971-201ENSMUST00000182423 1072 ntBASIC16.23■□□□□ 0.19
PtcraP0C6B2 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PtcraP0C6B2 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PtcraP0C6B2 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PtcraP0C6B2 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PtcraP0C6B2 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PtcraP0C6B2 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PtcraP0C6B2 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PtcraP0C6B2 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PtcraP0C6B2 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PtcraP0C6B2 Gm9885-202ENSMUST00000186234 2209 ntBASIC16.22■□□□□ 0.19
PtcraP0C6B2 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PtcraP0C6B2 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PtcraP0C6B2 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PtcraP0C6B2 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PtcraP0C6B2 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PtcraP0C6B2 Gm7514-201ENSMUST00000209475 934 ntBASIC16.22■□□□□ 0.19
PtcraP0C6B2 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PtcraP0C6B2 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PtcraP0C6B2 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC16.22■□□□□ 0.19
PtcraP0C6B2 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms