Protein–RNA interactions for Protein: P04180

LCAT, Phosphatidylcholine-sterol acyltransferase, humanhuman

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCATP04180 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
LCATP04180 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LCATP04180 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LCATP04180 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
LCATP04180 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
LCATP04180 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LCATP04180 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC18.57■□□□□ 0.56
LCATP04180 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LCATP04180 LHPP-203ENST00000392757 840 ntTSL 3 BASIC18.57■□□□□ 0.56
LCATP04180 AC104564.3-201ENST00000582367 638 ntBASIC18.57■□□□□ 0.56
LCATP04180 AL136967.2-201ENST00000623968 743 ntBASIC18.57■□□□□ 0.56
LCATP04180 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LCATP04180 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
LCATP04180 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LCATP04180 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LCATP04180 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC18.57■□□□□ 0.56
LCATP04180 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.56■□□□□ 0.56
LCATP04180 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.56■□□□□ 0.56
LCATP04180 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC18.56■□□□□ 0.56
LCATP04180 AC244015.2-201ENST00000616358 1861 ntBASIC18.56■□□□□ 0.56
LCATP04180 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LCATP04180 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
LCATP04180 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LCATP04180 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
LCATP04180 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.56■□□□□ 0.56
LCATP04180 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
LCATP04180 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
LCATP04180 AL031432.3-201ENST00000607698 485 ntBASIC18.56■□□□□ 0.56
LCATP04180 AC105233.4-201ENST00000642045 216 ntBASIC18.56■□□□□ 0.56
LCATP04180 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LCATP04180 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LCATP04180 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LCATP04180 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LCATP04180 AC007375.3-201ENST00000600936 2314 ntBASIC18.56■□□□□ 0.56
LCATP04180 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC18.56■□□□□ 0.56
LCATP04180 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
LCATP04180 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LCATP04180 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LCATP04180 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LCATP04180 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LCATP04180 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LCATP04180 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LCATP04180 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LCATP04180 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC18.55■□□□□ 0.56
LCATP04180 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LCATP04180 AC142381.2-201ENST00000566120 298 ntBASIC18.55■□□□□ 0.56
LCATP04180 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC18.55■□□□□ 0.56
LCATP04180 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC18.55■□□□□ 0.56
LCATP04180 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LCATP04180 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LCATP04180 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LCATP04180 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
LCATP04180 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.55■□□□□ 0.56
LCATP04180 ASL-203ENST00000380839 1765 ntTSL 5 BASIC18.55■□□□□ 0.56
LCATP04180 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
LCATP04180 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LCATP04180 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.55■□□□□ 0.56
LCATP04180 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LCATP04180 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
LCATP04180 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LCATP04180 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LCATP04180 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC18.54■□□□□ 0.56
LCATP04180 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LCATP04180 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LCATP04180 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LCATP04180 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LCATP04180 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LCATP04180 EBPL-204ENST00000378272 766 ntTSL 3 BASIC18.54■□□□□ 0.56
LCATP04180 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
LCATP04180 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
LCATP04180 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC18.54■□□□□ 0.56
LCATP04180 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
LCATP04180 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LCATP04180 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.54■□□□□ 0.56
LCATP04180 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LCATP04180 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC18.53■□□□□ 0.56
LCATP04180 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
LCATP04180 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LCATP04180 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LCATP04180 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LCATP04180 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
LCATP04180 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC18.53■□□□□ 0.56
LCATP04180 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
LCATP04180 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
LCATP04180 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.53■□□□□ 0.56
LCATP04180 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC18.53■□□□□ 0.56
LCATP04180 SUDS3P1-201ENST00000505831 966 ntBASIC18.53■□□□□ 0.56
LCATP04180 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC18.53■□□□□ 0.56
LCATP04180 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LCATP04180 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LCATP04180 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
LCATP04180 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.53■□□□□ 0.56
LCATP04180 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.52■□□□□ 0.56
LCATP04180 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LCATP04180 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
LCATP04180 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
LCATP04180 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
LCATP04180 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LCATP04180 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LCATP04180 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms