Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC13.22□□□□□ -0.29
Sh2d1aO88890 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sh2d1aO88890 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sh2d1aO88890 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sh2d1aO88890 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sh2d1aO88890 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sh2d1aO88890 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Sh2d1aO88890 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sh2d1aO88890 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sh2d1aO88890 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sh2d1aO88890 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC13.22□□□□□ -0.29
Sh2d1aO88890 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC13.22□□□□□ -0.29
Sh2d1aO88890 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sh2d1aO88890 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC13.22□□□□□ -0.29
Sh2d1aO88890 AC137127.1-201ENSMUST00000213466 1078 ntBASIC13.22□□□□□ -0.29
Sh2d1aO88890 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Sh2d1aO88890 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sh2d1aO88890 Gm18688-201ENSMUST00000204695 1859 ntBASIC13.22□□□□□ -0.29
Sh2d1aO88890 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sh2d1aO88890 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sh2d1aO88890 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sh2d1aO88890 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sh2d1aO88890 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sh2d1aO88890 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sh2d1aO88890 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sh2d1aO88890 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sh2d1aO88890 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sh2d1aO88890 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sh2d1aO88890 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sh2d1aO88890 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sh2d1aO88890 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sh2d1aO88890 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sh2d1aO88890 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sh2d1aO88890 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sh2d1aO88890 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sh2d1aO88890 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sh2d1aO88890 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Sh2d1aO88890 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sh2d1aO88890 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Sh2d1aO88890 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Sh2d1aO88890 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sh2d1aO88890 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Sh2d1aO88890 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sh2d1aO88890 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sh2d1aO88890 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Sh2d1aO88890 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sh2d1aO88890 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sh2d1aO88890 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sh2d1aO88890 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sh2d1aO88890 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC13.2□□□□□ -0.3
Sh2d1aO88890 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sh2d1aO88890 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Sh2d1aO88890 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC13.2□□□□□ -0.3
Sh2d1aO88890 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Sh2d1aO88890 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Sh2d1aO88890 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sh2d1aO88890 AC126028.2-201ENSMUST00000228100 1833 ntBASIC13.2□□□□□ -0.3
Sh2d1aO88890 Rncr4-201ENSMUST00000194541 2234 ntBASIC13.2□□□□□ -0.3
Sh2d1aO88890 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Sh2d1aO88890 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sh2d1aO88890 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
Sh2d1aO88890 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sh2d1aO88890 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sh2d1aO88890 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sh2d1aO88890 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sh2d1aO88890 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sh2d1aO88890 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sh2d1aO88890 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sh2d1aO88890 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sh2d1aO88890 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sh2d1aO88890 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sh2d1aO88890 Gm26833-201ENSMUST00000180899 440 ntBASIC13.19□□□□□ -0.3
Sh2d1aO88890 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC13.19□□□□□ -0.3
Sh2d1aO88890 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Sh2d1aO88890 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC13.19□□□□□ -0.3
Sh2d1aO88890 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sh2d1aO88890 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sh2d1aO88890 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sh2d1aO88890 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sh2d1aO88890 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sh2d1aO88890 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sh2d1aO88890 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sh2d1aO88890 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sh2d1aO88890 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC13.18□□□□□ -0.3
Sh2d1aO88890 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC13.18□□□□□ -0.3
Sh2d1aO88890 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Sh2d1aO88890 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Sh2d1aO88890 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC13.18□□□□□ -0.3
Sh2d1aO88890 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sh2d1aO88890 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sh2d1aO88890 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Sh2d1aO88890 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sh2d1aO88890 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sh2d1aO88890 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sh2d1aO88890 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sh2d1aO88890 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Sh2d1aO88890 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sh2d1aO88890 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sh2d1aO88890 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Sh2d1aO88890 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms