Protein–RNA interactions for Protein: O88456

Capns1, Calpain small subunit 1, mousemouse

Predictions only

Length 269 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capns1O88456 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Capns1O88456 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Capns1O88456 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
Capns1O88456 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Capns1O88456 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Capns1O88456 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Capns1O88456 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC17.27■□□□□ 0.36
Capns1O88456 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Capns1O88456 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Capns1O88456 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.27■□□□□ 0.36
Capns1O88456 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
Capns1O88456 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Capns1O88456 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC17.27■□□□□ 0.36
Capns1O88456 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Capns1O88456 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Capns1O88456 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Capns1O88456 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Capns1O88456 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Capns1O88456 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Capns1O88456 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Capns1O88456 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Capns1O88456 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Capns1O88456 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Capns1O88456 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Capns1O88456 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Capns1O88456 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Capns1O88456 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Capns1O88456 Gm43137-201ENSMUST00000198052 594 ntBASIC17.26■□□□□ 0.35
Capns1O88456 Gm43017-201ENSMUST00000198296 752 ntBASIC17.26■□□□□ 0.35
Capns1O88456 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Capns1O88456 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC17.26■□□□□ 0.35
Capns1O88456 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Capns1O88456 Gm27045-201ENSMUST00000182145 1402 ntBASIC17.26■□□□□ 0.35
Capns1O88456 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Capns1O88456 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Capns1O88456 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.26■□□□□ 0.35
Capns1O88456 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC17.26■□□□□ 0.35
Capns1O88456 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Capns1O88456 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Capns1O88456 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Capns1O88456 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Capns1O88456 Gm6085-201ENSMUST00000182774 1470 ntBASIC17.25■□□□□ 0.35
Capns1O88456 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Capns1O88456 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Capns1O88456 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Capns1O88456 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Capns1O88456 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Capns1O88456 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Capns1O88456 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC17.25■□□□□ 0.35
Capns1O88456 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Capns1O88456 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Capns1O88456 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
Capns1O88456 Mir7075-201ENSMUST00000184187 82 ntBASIC17.25■□□□□ 0.35
Capns1O88456 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC17.25■□□□□ 0.35
Capns1O88456 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Capns1O88456 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Capns1O88456 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Capns1O88456 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Capns1O88456 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Capns1O88456 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Capns1O88456 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Capns1O88456 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Capns1O88456 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Capns1O88456 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Capns1O88456 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.25■□□□□ 0.35
Capns1O88456 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Capns1O88456 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Capns1O88456 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Capns1O88456 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Capns1O88456 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Capns1O88456 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC17.24■□□□□ 0.35
Capns1O88456 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Capns1O88456 Gm5874-201ENSMUST00000096101 508 ntBASIC17.24■□□□□ 0.35
Capns1O88456 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Capns1O88456 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Capns1O88456 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Capns1O88456 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.24■□□□□ 0.35
Capns1O88456 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Capns1O88456 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Capns1O88456 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Capns1O88456 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Capns1O88456 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Capns1O88456 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Capns1O88456 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
Capns1O88456 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Capns1O88456 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Capns1O88456 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Capns1O88456 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Capns1O88456 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Capns1O88456 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Capns1O88456 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Capns1O88456 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Capns1O88456 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.23■□□□□ 0.35
Capns1O88456 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Capns1O88456 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Capns1O88456 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Capns1O88456 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Capns1O88456 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Capns1O88456 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
Capns1O88456 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms