Protein–RNA interactions for Protein: O55240

Rdh5, 11-cis retinol dehydrogenase, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh5O55240 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rdh5O55240 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rdh5O55240 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rdh5O55240 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rdh5O55240 Gm10129-202ENSMUST00000193100 1316 ntBASIC17.74■□□□□ 0.43
Rdh5O55240 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rdh5O55240 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.74■□□□□ 0.43
Rdh5O55240 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rdh5O55240 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rdh5O55240 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Rdh5O55240 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.74■□□□□ 0.43
Rdh5O55240 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rdh5O55240 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rdh5O55240 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.74■□□□□ 0.43
Rdh5O55240 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rdh5O55240 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rdh5O55240 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rdh5O55240 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rdh5O55240 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rdh5O55240 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rdh5O55240 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rdh5O55240 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.74■□□□□ 0.43
Rdh5O55240 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rdh5O55240 Reep4-203ENSMUST00000226563 1444 ntBASIC17.73■□□□□ 0.43
Rdh5O55240 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rdh5O55240 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rdh5O55240 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Rdh5O55240 Gm42642-201ENSMUST00000200683 355 ntBASIC17.73■□□□□ 0.43
Rdh5O55240 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rdh5O55240 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rdh5O55240 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rdh5O55240 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rdh5O55240 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rdh5O55240 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rdh5O55240 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rdh5O55240 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rdh5O55240 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.72■□□□□ 0.43
Rdh5O55240 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rdh5O55240 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rdh5O55240 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Rdh5O55240 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rdh5O55240 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC17.72■□□□□ 0.43
Rdh5O55240 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rdh5O55240 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC17.72■□□□□ 0.43
Rdh5O55240 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC17.72■□□□□ 0.43
Rdh5O55240 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rdh5O55240 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rdh5O55240 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rdh5O55240 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rdh5O55240 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rdh5O55240 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rdh5O55240 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rdh5O55240 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rdh5O55240 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Rdh5O55240 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Rdh5O55240 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rdh5O55240 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rdh5O55240 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.71■□□□□ 0.43
Rdh5O55240 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Rdh5O55240 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC17.71■□□□□ 0.43
Rdh5O55240 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Rdh5O55240 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rdh5O55240 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Rdh5O55240 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rdh5O55240 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Rdh5O55240 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rdh5O55240 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rdh5O55240 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rdh5O55240 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rdh5O55240 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.7■□□□□ 0.42
Rdh5O55240 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Rdh5O55240 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rdh5O55240 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rdh5O55240 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rdh5O55240 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rdh5O55240 Gm42569-201ENSMUST00000200539 472 ntBASIC17.7■□□□□ 0.42
Rdh5O55240 CT010467.1-202ENSMUST00000205406 714 ntBASIC17.7■□□□□ 0.42
Rdh5O55240 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rdh5O55240 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rdh5O55240 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rdh5O55240 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rdh5O55240 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.7■□□□□ 0.42
Rdh5O55240 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rdh5O55240 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.7■□□□□ 0.42
Rdh5O55240 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Rdh5O55240 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Rdh5O55240 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rdh5O55240 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rdh5O55240 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rdh5O55240 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rdh5O55240 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rdh5O55240 Gm7291-201ENSMUST00000199147 382 ntBASIC17.69■□□□□ 0.42
Rdh5O55240 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC17.69■□□□□ 0.42
Rdh5O55240 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC17.69■□□□□ 0.42
Rdh5O55240 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Rdh5O55240 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.69■□□□□ 0.42
Rdh5O55240 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rdh5O55240 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rdh5O55240 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.69■□□□□ 0.42
Rdh5O55240 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms