Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
XRCC2O43543 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
XRCC2O43543 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
XRCC2O43543 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
XRCC2O43543 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
XRCC2O43543 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
XRCC2O43543 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
XRCC2O43543 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC18.46■□□□□ 0.55
XRCC2O43543 MAG-206ENST00000597035 542 ntTSL 4 BASIC18.46■□□□□ 0.55
XRCC2O43543 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.46■□□□□ 0.55
XRCC2O43543 AC026471.6-201ENST00000622954 1905 ntBASIC18.46■□□□□ 0.55
XRCC2O43543 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
XRCC2O43543 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
XRCC2O43543 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC18.46■□□□□ 0.55
XRCC2O43543 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
XRCC2O43543 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
XRCC2O43543 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC18.46■□□□□ 0.55
XRCC2O43543 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
XRCC2O43543 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC18.46■□□□□ 0.55
XRCC2O43543 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.46■□□□□ 0.55
XRCC2O43543 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.46■□□□□ 0.55
XRCC2O43543 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
XRCC2O43543 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
XRCC2O43543 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
XRCC2O43543 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
XRCC2O43543 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
XRCC2O43543 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.45■□□□□ 0.54
XRCC2O43543 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
XRCC2O43543 AP006587.3-201ENST00000525742 1516 ntBASIC18.45■□□□□ 0.54
XRCC2O43543 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
XRCC2O43543 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
XRCC2O43543 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC18.45■□□□□ 0.54
XRCC2O43543 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
XRCC2O43543 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
XRCC2O43543 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC18.45■□□□□ 0.54
XRCC2O43543 AC105233.4-201ENST00000642045 216 ntBASIC18.45■□□□□ 0.54
XRCC2O43543 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18.45■□□□□ 0.54
XRCC2O43543 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.45■□□□□ 0.54
XRCC2O43543 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
XRCC2O43543 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
XRCC2O43543 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
XRCC2O43543 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
XRCC2O43543 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
XRCC2O43543 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
XRCC2O43543 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
XRCC2O43543 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
XRCC2O43543 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
XRCC2O43543 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC18.44■□□□□ 0.54
XRCC2O43543 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC18.44■□□□□ 0.54
XRCC2O43543 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
XRCC2O43543 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC18.44■□□□□ 0.54
XRCC2O43543 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC18.44■□□□□ 0.54
XRCC2O43543 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
XRCC2O43543 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
XRCC2O43543 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
XRCC2O43543 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
XRCC2O43543 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
XRCC2O43543 AC009237.3-201ENST00000393279 1427 ntBASIC18.43■□□□□ 0.54
XRCC2O43543 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.43■□□□□ 0.54
XRCC2O43543 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
XRCC2O43543 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC18.43■□□□□ 0.54
XRCC2O43543 MIR572-201ENST00000384983 95 ntBASIC18.43■□□□□ 0.54
XRCC2O43543 MFF-208ENST00000409616 1247 ntTSL 5 BASIC18.43■□□□□ 0.54
XRCC2O43543 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC18.43■□□□□ 0.54
XRCC2O43543 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
XRCC2O43543 AL031432.3-201ENST00000607698 485 ntBASIC18.43■□□□□ 0.54
XRCC2O43543 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
XRCC2O43543 AL136967.2-201ENST00000623968 743 ntBASIC18.43■□□□□ 0.54
XRCC2O43543 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
XRCC2O43543 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
XRCC2O43543 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC18.43■□□□□ 0.54
XRCC2O43543 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
XRCC2O43543 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
XRCC2O43543 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.43■□□□□ 0.54
XRCC2O43543 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
XRCC2O43543 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.42■□□□□ 0.54
XRCC2O43543 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
XRCC2O43543 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
XRCC2O43543 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
XRCC2O43543 EBPL-204ENST00000378272 766 ntTSL 3 BASIC18.42■□□□□ 0.54
XRCC2O43543 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.42■□□□□ 0.54
XRCC2O43543 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
XRCC2O43543 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.42■□□□□ 0.54
XRCC2O43543 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
XRCC2O43543 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
XRCC2O43543 ASL-203ENST00000380839 1765 ntTSL 5 BASIC18.42■□□□□ 0.54
XRCC2O43543 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
XRCC2O43543 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
XRCC2O43543 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
XRCC2O43543 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.42■□□□□ 0.54
XRCC2O43543 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
XRCC2O43543 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
XRCC2O43543 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
XRCC2O43543 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.41■□□□□ 0.54
XRCC2O43543 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
XRCC2O43543 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
XRCC2O43543 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
XRCC2O43543 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC18.41■□□□□ 0.54
XRCC2O43543 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC18.41■□□□□ 0.54
XRCC2O43543 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms