Protein–RNA interactions for Protein: O35118

Gfra3, GDNF family receptor alpha-3, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra3O35118 Gm5075-201ENSMUST00000196916 622 ntBASIC16.18■□□□□ 0.18
Gfra3O35118 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gfra3O35118 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC16.18■□□□□ 0.18
Gfra3O35118 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gfra3O35118 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC16.18■□□□□ 0.18
Gfra3O35118 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC16.18■□□□□ 0.18
Gfra3O35118 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gfra3O35118 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Gfra3O35118 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gfra3O35118 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gfra3O35118 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Gfra3O35118 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gfra3O35118 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
Gfra3O35118 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gfra3O35118 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gfra3O35118 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Gfra3O35118 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
Gfra3O35118 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gfra3O35118 Gm13148-201ENSMUST00000118892 745 ntBASIC16.17■□□□□ 0.18
Gfra3O35118 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gfra3O35118 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC16.17■□□□□ 0.18
Gfra3O35118 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC16.17■□□□□ 0.18
Gfra3O35118 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC16.17■□□□□ 0.18
Gfra3O35118 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gfra3O35118 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gfra3O35118 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gfra3O35118 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC16.16■□□□□ 0.18
Gfra3O35118 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gfra3O35118 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Gfra3O35118 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gfra3O35118 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gfra3O35118 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Gfra3O35118 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gfra3O35118 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gfra3O35118 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Gfra3O35118 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Gfra3O35118 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gfra3O35118 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gfra3O35118 Gm37444-201ENSMUST00000193605 439 ntBASIC16.16■□□□□ 0.18
Gfra3O35118 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC16.16■□□□□ 0.18
Gfra3O35118 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Gfra3O35118 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Gfra3O35118 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Gfra3O35118 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gfra3O35118 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gfra3O35118 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gfra3O35118 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC16.15■□□□□ 0.18
Gfra3O35118 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gfra3O35118 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gfra3O35118 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Gfra3O35118 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Gfra3O35118 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC16.15■□□□□ 0.18
Gfra3O35118 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gfra3O35118 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gfra3O35118 Golph3-202ENSMUST00000226517 2359 ntBASIC16.15■□□□□ 0.18
Gfra3O35118 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Gfra3O35118 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Gfra3O35118 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gfra3O35118 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC16.15■□□□□ 0.18
Gfra3O35118 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gfra3O35118 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gfra3O35118 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
Gfra3O35118 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Gfra3O35118 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gfra3O35118 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Gfra3O35118 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gfra3O35118 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
Gfra3O35118 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Gfra3O35118 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC16.14■□□□□ 0.17
Gfra3O35118 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Gfra3O35118 Gm6211-202ENSMUST00000167849 925 ntBASIC16.14■□□□□ 0.17
Gfra3O35118 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC16.14■□□□□ 0.17
Gfra3O35118 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC16.14■□□□□ 0.17
Gfra3O35118 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Gfra3O35118 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gfra3O35118 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gfra3O35118 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gfra3O35118 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gfra3O35118 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gfra3O35118 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gfra3O35118 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Gfra3O35118 Iqck-206ENSMUST00000208658 2891 ntBASIC16.13■□□□□ 0.17
Gfra3O35118 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Gfra3O35118 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Gfra3O35118 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gfra3O35118 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gfra3O35118 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC16.13■□□□□ 0.17
Gfra3O35118 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gfra3O35118 AC122335.2-201ENSMUST00000213901 6181 ntBASIC16.13■□□□□ 0.17
Gfra3O35118 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Gfra3O35118 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Gfra3O35118 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC16.13■□□□□ 0.17
Gfra3O35118 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
Gfra3O35118 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gfra3O35118 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gfra3O35118 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Gfra3O35118 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gfra3O35118 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gfra3O35118 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Gfra3O35118 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms