Protein–RNA interactions for Protein: O15041

SEMA3E, Semaphorin-3E, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3EO15041 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC25.79■■□□□ 1.72
SEMA3EO15041 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC25.79■■□□□ 1.72
SEMA3EO15041 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
SEMA3EO15041 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
SEMA3EO15041 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
SEMA3EO15041 AC080038.3-201ENST00000623346 1952 ntBASIC25.78■■□□□ 1.72
SEMA3EO15041 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
SEMA3EO15041 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
SEMA3EO15041 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
SEMA3EO15041 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
SEMA3EO15041 POU5F1P4-201ENST00000413175 1085 ntBASIC25.78■■□□□ 1.72
SEMA3EO15041 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC25.78■■□□□ 1.72
SEMA3EO15041 CNN2P6-201ENST00000439038 900 ntBASIC25.78■■□□□ 1.72
SEMA3EO15041 AC104771.1-201ENST00000603335 964 ntBASIC25.78■■□□□ 1.72
SEMA3EO15041 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC25.78■■□□□ 1.72
SEMA3EO15041 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC25.78■■□□□ 1.72
SEMA3EO15041 AC008175.2-201ENST00000612840 297 ntBASIC25.78■■□□□ 1.72
SEMA3EO15041 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
SEMA3EO15041 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC25.78■■□□□ 1.72
SEMA3EO15041 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC25.78■■□□□ 1.72
SEMA3EO15041 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
SEMA3EO15041 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
SEMA3EO15041 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC25.78■■□□□ 1.72
SEMA3EO15041 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC25.78■■□□□ 1.72
SEMA3EO15041 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC25.78■■□□□ 1.72
SEMA3EO15041 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
SEMA3EO15041 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
SEMA3EO15041 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC25.77■■□□□ 1.72
SEMA3EO15041 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC25.77■■□□□ 1.72
SEMA3EO15041 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
SEMA3EO15041 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
SEMA3EO15041 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC25.76■■□□□ 1.71
SEMA3EO15041 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
SEMA3EO15041 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC25.76■■□□□ 1.71
SEMA3EO15041 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC25.76■■□□□ 1.71
SEMA3EO15041 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC25.76■■□□□ 1.71
SEMA3EO15041 SLC7A5P2-201ENST00000553010 536 ntBASIC25.76■■□□□ 1.71
SEMA3EO15041 AC005181.1-201ENST00000604782 1256 ntBASIC25.76■■□□□ 1.71
SEMA3EO15041 AL050303.2-201ENST00000619798 666 ntBASIC25.76■■□□□ 1.71
SEMA3EO15041 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC25.76■■□□□ 1.71
SEMA3EO15041 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
SEMA3EO15041 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
SEMA3EO15041 AC012676.1-201ENST00000574705 1949 ntBASIC25.76■■□□□ 1.71
SEMA3EO15041 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC25.76■■□□□ 1.71
SEMA3EO15041 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
SEMA3EO15041 AC003102.1-202ENST00000563394 1796 ntBASIC25.75■■□□□ 1.71
SEMA3EO15041 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
SEMA3EO15041 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
SEMA3EO15041 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC25.75■■□□□ 1.71
SEMA3EO15041 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
SEMA3EO15041 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC25.75■■□□□ 1.71
SEMA3EO15041 AC120498.10-201ENST00000621827 505 ntBASIC25.75■■□□□ 1.71
SEMA3EO15041 ME2-208ENST00000638937 2471 ntTSL 5 BASIC25.75■■□□□ 1.71
SEMA3EO15041 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC25.74■■□□□ 1.71
SEMA3EO15041 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC25.74■■□□□ 1.71
SEMA3EO15041 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC25.74■■□□□ 1.71
SEMA3EO15041 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
SEMA3EO15041 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC25.74■■□□□ 1.71
SEMA3EO15041 GPX1P1-201ENST00000388829 606 ntBASIC25.74■■□□□ 1.71
SEMA3EO15041 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
SEMA3EO15041 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC25.74■■□□□ 1.71
SEMA3EO15041 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC25.74■■□□□ 1.71
SEMA3EO15041 AL109923.1-201ENST00000618799 583 ntBASIC25.74■■□□□ 1.71
SEMA3EO15041 AC013268.1-206ENST00000638368 961 ntBASIC25.74■■□□□ 1.71
SEMA3EO15041 AC112229.1-201ENST00000639295 961 ntBASIC25.74■■□□□ 1.71
SEMA3EO15041 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
SEMA3EO15041 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
SEMA3EO15041 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC25.74■■□□□ 1.71
SEMA3EO15041 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
SEMA3EO15041 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC25.74■■□□□ 1.71
SEMA3EO15041 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC25.73■■□□□ 1.71
SEMA3EO15041 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC25.73■■□□□ 1.71
SEMA3EO15041 C9orf163-202ENST00000624034 2573 ntBASIC25.73■■□□□ 1.71
SEMA3EO15041 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
SEMA3EO15041 TERF1P5-201ENST00000477545 1207 ntBASIC25.73■■□□□ 1.71
SEMA3EO15041 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC25.73■■□□□ 1.71
SEMA3EO15041 EMC9-206ENST00000560403 872 ntTSL 2 BASIC25.73■■□□□ 1.71
SEMA3EO15041 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC25.73■■□□□ 1.71
SEMA3EO15041 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
SEMA3EO15041 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
SEMA3EO15041 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC25.72■■□□□ 1.71
SEMA3EO15041 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
SEMA3EO15041 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC25.72■■□□□ 1.71
SEMA3EO15041 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
SEMA3EO15041 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
SEMA3EO15041 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
SEMA3EO15041 UQCRFS1P1-201ENST00000435169 820 ntBASIC25.72■■□□□ 1.71
SEMA3EO15041 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC25.72■■□□□ 1.71
SEMA3EO15041 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC25.72■■□□□ 1.71
SEMA3EO15041 RARG-204ENST00000543726 1779 ntTSL 2 BASIC25.72■■□□□ 1.71
SEMA3EO15041 KRT16P2-201ENST00000414673 1423 ntBASIC25.71■■□□□ 1.71
SEMA3EO15041 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC25.71■■□□□ 1.71
SEMA3EO15041 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC25.71■■□□□ 1.71
SEMA3EO15041 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC25.71■■□□□ 1.71
SEMA3EO15041 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC25.71■■□□□ 1.71
SEMA3EO15041 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC25.71■■□□□ 1.71
SEMA3EO15041 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
SEMA3EO15041 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC25.71■■□□□ 1.71
SEMA3EO15041 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC25.71■■□□□ 1.71
SEMA3EO15041 AC007322.4-201ENST00000509611 723 ntBASIC25.71■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms