Protein–RNA interactions for Protein: D3YU81

Rfx8, DNA-binding protein RFX8, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx8D3YU81 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rfx8D3YU81 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rfx8D3YU81 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rfx8D3YU81 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rfx8D3YU81 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rfx8D3YU81 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC19.82■□□□□ 0.76
Rfx8D3YU81 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.82■□□□□ 0.76
Rfx8D3YU81 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rfx8D3YU81 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rfx8D3YU81 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rfx8D3YU81 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rfx8D3YU81 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rfx8D3YU81 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.81■□□□□ 0.76
Rfx8D3YU81 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rfx8D3YU81 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rfx8D3YU81 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rfx8D3YU81 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.81■□□□□ 0.76
Rfx8D3YU81 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rfx8D3YU81 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rfx8D3YU81 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rfx8D3YU81 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rfx8D3YU81 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rfx8D3YU81 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Rfx8D3YU81 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.8■□□□□ 0.76
Rfx8D3YU81 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rfx8D3YU81 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rfx8D3YU81 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.8■□□□□ 0.76
Rfx8D3YU81 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rfx8D3YU81 AV356131-201ENSMUST00000206201 750 ntBASIC19.8■□□□□ 0.76
Rfx8D3YU81 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC19.8■□□□□ 0.76
Rfx8D3YU81 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Rfx8D3YU81 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Rfx8D3YU81 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rfx8D3YU81 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rfx8D3YU81 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Rfx8D3YU81 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rfx8D3YU81 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rfx8D3YU81 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rfx8D3YU81 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rfx8D3YU81 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rfx8D3YU81 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rfx8D3YU81 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Rfx8D3YU81 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rfx8D3YU81 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rfx8D3YU81 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rfx8D3YU81 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rfx8D3YU81 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rfx8D3YU81 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rfx8D3YU81 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rfx8D3YU81 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rfx8D3YU81 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC19.78■□□□□ 0.76
Rfx8D3YU81 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rfx8D3YU81 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rfx8D3YU81 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rfx8D3YU81 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Rfx8D3YU81 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rfx8D3YU81 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rfx8D3YU81 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Rfx8D3YU81 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Rfx8D3YU81 BC021767-201ENSMUST00000126387 1716 ntBASIC19.77■□□□□ 0.76
Rfx8D3YU81 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rfx8D3YU81 Gm10849-201ENSMUST00000100397 618 ntBASIC19.77■□□□□ 0.76
Rfx8D3YU81 Gm13534-201ENSMUST00000121169 513 ntBASIC19.77■□□□□ 0.76
Rfx8D3YU81 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Rfx8D3YU81 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rfx8D3YU81 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rfx8D3YU81 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Rfx8D3YU81 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Rfx8D3YU81 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Rfx8D3YU81 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Rfx8D3YU81 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rfx8D3YU81 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rfx8D3YU81 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rfx8D3YU81 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rfx8D3YU81 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rfx8D3YU81 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rfx8D3YU81 Gm42569-201ENSMUST00000200539 472 ntBASIC19.76■□□□□ 0.75
Rfx8D3YU81 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.76■□□□□ 0.75
Rfx8D3YU81 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Rfx8D3YU81 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rfx8D3YU81 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rfx8D3YU81 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rfx8D3YU81 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rfx8D3YU81 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Rfx8D3YU81 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rfx8D3YU81 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rfx8D3YU81 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rfx8D3YU81 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Rfx8D3YU81 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rfx8D3YU81 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Rfx8D3YU81 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rfx8D3YU81 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rfx8D3YU81 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rfx8D3YU81 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rfx8D3YU81 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Rfx8D3YU81 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC19.75■□□□□ 0.75
Rfx8D3YU81 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
Rfx8D3YU81 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rfx8D3YU81 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rfx8D3YU81 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms