Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CNOT1A5YKK6 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.58■□□□□ 0.88
CNOT1A5YKK6 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CNOT1A5YKK6 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
CNOT1A5YKK6 DUSP8P3-201ENST00000399571 1760 ntBASIC20.57■□□□□ 0.88
CNOT1A5YKK6 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
CNOT1A5YKK6 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CNOT1A5YKK6 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC20.57■□□□□ 0.88
CNOT1A5YKK6 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CNOT1A5YKK6 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.57■□□□□ 0.88
CNOT1A5YKK6 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC20.57■□□□□ 0.88
CNOT1A5YKK6 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
CNOT1A5YKK6 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CNOT1A5YKK6 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC20.57■□□□□ 0.88
CNOT1A5YKK6 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CNOT1A5YKK6 REXO2-216ENST00000544196 452 ntTSL 3 BASIC20.57■□□□□ 0.88
CNOT1A5YKK6 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CNOT1A5YKK6 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CNOT1A5YKK6 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CNOT1A5YKK6 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CNOT1A5YKK6 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
CNOT1A5YKK6 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
CNOT1A5YKK6 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CNOT1A5YKK6 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.56■□□□□ 0.88
CNOT1A5YKK6 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.56■□□□□ 0.88
CNOT1A5YKK6 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.56■□□□□ 0.88
CNOT1A5YKK6 EEF1DP3-203ENST00000566025 782 ntBASIC20.56■□□□□ 0.88
CNOT1A5YKK6 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CNOT1A5YKK6 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CNOT1A5YKK6 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.56■□□□□ 0.88
CNOT1A5YKK6 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CNOT1A5YKK6 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CNOT1A5YKK6 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CNOT1A5YKK6 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CNOT1A5YKK6 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC20.56■□□□□ 0.88
CNOT1A5YKK6 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CNOT1A5YKK6 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CNOT1A5YKK6 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CNOT1A5YKK6 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CNOT1A5YKK6 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CNOT1A5YKK6 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CNOT1A5YKK6 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CNOT1A5YKK6 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC20.54■□□□□ 0.88
CNOT1A5YKK6 AC069544.1-201ENST00000609399 999 ntBASIC20.54■□□□□ 0.88
CNOT1A5YKK6 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CNOT1A5YKK6 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CNOT1A5YKK6 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.54■□□□□ 0.88
CNOT1A5YKK6 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.54■□□□□ 0.88
CNOT1A5YKK6 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.54■□□□□ 0.88
CNOT1A5YKK6 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.54■□□□□ 0.88
CNOT1A5YKK6 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CNOT1A5YKK6 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
CNOT1A5YKK6 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CNOT1A5YKK6 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CNOT1A5YKK6 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CNOT1A5YKK6 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CNOT1A5YKK6 AC233263.1-201ENST00000578059 224 ntBASIC20.53■□□□□ 0.88
CNOT1A5YKK6 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CNOT1A5YKK6 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CNOT1A5YKK6 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CNOT1A5YKK6 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CNOT1A5YKK6 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CNOT1A5YKK6 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.53■□□□□ 0.88
CNOT1A5YKK6 RBM17P2-201ENST00000616397 1405 ntBASIC20.53■□□□□ 0.88
CNOT1A5YKK6 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CNOT1A5YKK6 AC133561.5-201ENST00000635547 218 ntBASIC20.53■□□□□ 0.88
CNOT1A5YKK6 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CNOT1A5YKK6 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CNOT1A5YKK6 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CNOT1A5YKK6 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
CNOT1A5YKK6 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.52■□□□□ 0.88
CNOT1A5YKK6 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.52■□□□□ 0.88
CNOT1A5YKK6 TK2-213ENST00000563369 882 ntTSL 5 BASIC20.52■□□□□ 0.88
CNOT1A5YKK6 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC20.52■□□□□ 0.88
CNOT1A5YKK6 AC012306.2-201ENST00000609350 630 ntBASIC20.52■□□□□ 0.88
CNOT1A5YKK6 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
CNOT1A5YKK6 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CNOT1A5YKK6 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.52■□□□□ 0.88
CNOT1A5YKK6 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.52■□□□□ 0.88
CNOT1A5YKK6 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CNOT1A5YKK6 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CNOT1A5YKK6 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CNOT1A5YKK6 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CNOT1A5YKK6 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
CNOT1A5YKK6 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.87
CNOT1A5YKK6 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.52■□□□□ 0.87
CNOT1A5YKK6 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CNOT1A5YKK6 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.51■□□□□ 0.87
CNOT1A5YKK6 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CNOT1A5YKK6 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.51■□□□□ 0.87
CNOT1A5YKK6 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.51■□□□□ 0.87
CNOT1A5YKK6 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CNOT1A5YKK6 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CNOT1A5YKK6 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CNOT1A5YKK6 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.51■□□□□ 0.87
CNOT1A5YKK6 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CNOT1A5YKK6 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CNOT1A5YKK6 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.51■□□□□ 0.87
CNOT1A5YKK6 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
CNOT1A5YKK6 KRT16P2-201ENST00000414673 1423 ntBASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms