Protein–RNA interactions for Protein: A0A0B4J1K2

Trav9-4, T cell receptor alpha variable 9-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-4A0A0B4J1K2 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav9-4A0A0B4J1K2 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Trav9-4A0A0B4J1K2 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav9-4A0A0B4J1K2 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav9-4A0A0B4J1K2 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav9-4A0A0B4J1K2 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Trav9-4A0A0B4J1K2 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav9-4A0A0B4J1K2 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav9-4A0A0B4J1K2 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Trav9-4A0A0B4J1K2 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav9-4A0A0B4J1K2 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav9-4A0A0B4J1K2 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav9-4A0A0B4J1K2 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Trav9-4A0A0B4J1K2 Gm27032-201ENSMUST00000183124 1116 ntBASIC14.05□□□□□ -0.16
Trav9-4A0A0B4J1K2 Gm42569-201ENSMUST00000200539 472 ntBASIC14.05□□□□□ -0.16
Trav9-4A0A0B4J1K2 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav9-4A0A0B4J1K2 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav9-4A0A0B4J1K2 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav9-4A0A0B4J1K2 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav9-4A0A0B4J1K2 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav9-4A0A0B4J1K2 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav9-4A0A0B4J1K2 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav9-4A0A0B4J1K2 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav9-4A0A0B4J1K2 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Trav9-4A0A0B4J1K2 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav9-4A0A0B4J1K2 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav9-4A0A0B4J1K2 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Trav9-4A0A0B4J1K2 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Trav9-4A0A0B4J1K2 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav9-4A0A0B4J1K2 AC126028.2-201ENSMUST00000228100 1833 ntBASIC14.04□□□□□ -0.16
Trav9-4A0A0B4J1K2 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav9-4A0A0B4J1K2 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav9-4A0A0B4J1K2 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav9-4A0A0B4J1K2 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav9-4A0A0B4J1K2 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav9-4A0A0B4J1K2 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC14.04□□□□□ -0.16
Trav9-4A0A0B4J1K2 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
Trav9-4A0A0B4J1K2 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav9-4A0A0B4J1K2 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC14.04□□□□□ -0.16
Trav9-4A0A0B4J1K2 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav9-4A0A0B4J1K2 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav9-4A0A0B4J1K2 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav9-4A0A0B4J1K2 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC14.04□□□□□ -0.16
Trav9-4A0A0B4J1K2 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav9-4A0A0B4J1K2 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC14.04□□□□□ -0.16
Trav9-4A0A0B4J1K2 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Trav9-4A0A0B4J1K2 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav9-4A0A0B4J1K2 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav9-4A0A0B4J1K2 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav9-4A0A0B4J1K2 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav9-4A0A0B4J1K2 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav9-4A0A0B4J1K2 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC14.03□□□□□ -0.16
Trav9-4A0A0B4J1K2 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav9-4A0A0B4J1K2 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav9-4A0A0B4J1K2 Gm13146-201ENSMUST00000118508 780 ntBASIC14.03□□□□□ -0.16
Trav9-4A0A0B4J1K2 Gm26571-201ENSMUST00000181399 666 ntBASIC14.03□□□□□ -0.16
Trav9-4A0A0B4J1K2 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav9-4A0A0B4J1K2 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav9-4A0A0B4J1K2 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav9-4A0A0B4J1K2 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav9-4A0A0B4J1K2 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Trav9-4A0A0B4J1K2 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav9-4A0A0B4J1K2 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav9-4A0A0B4J1K2 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav9-4A0A0B4J1K2 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav9-4A0A0B4J1K2 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav9-4A0A0B4J1K2 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Trav9-4A0A0B4J1K2 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav9-4A0A0B4J1K2 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav9-4A0A0B4J1K2 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trav9-4A0A0B4J1K2 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
Trav9-4A0A0B4J1K2 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav9-4A0A0B4J1K2 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trav9-4A0A0B4J1K2 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav9-4A0A0B4J1K2 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trav9-4A0A0B4J1K2 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC14.02□□□□□ -0.17
Trav9-4A0A0B4J1K2 AV356131-201ENSMUST00000206201 750 ntBASIC14.02□□□□□ -0.17
Trav9-4A0A0B4J1K2 Ap3s1-204ENSMUST00000225520 957 ntBASIC14.02□□□□□ -0.17
Trav9-4A0A0B4J1K2 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trav9-4A0A0B4J1K2 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Trav9-4A0A0B4J1K2 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trav9-4A0A0B4J1K2 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trav9-4A0A0B4J1K2 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav9-4A0A0B4J1K2 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav9-4A0A0B4J1K2 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav9-4A0A0B4J1K2 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav9-4A0A0B4J1K2 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav9-4A0A0B4J1K2 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC14.01□□□□□ -0.17
Trav9-4A0A0B4J1K2 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav9-4A0A0B4J1K2 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav9-4A0A0B4J1K2 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav9-4A0A0B4J1K2 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav9-4A0A0B4J1K2 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC14.01□□□□□ -0.17
Trav9-4A0A0B4J1K2 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC14.01□□□□□ -0.17
Trav9-4A0A0B4J1K2 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav9-4A0A0B4J1K2 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC14.01□□□□□ -0.17
Trav9-4A0A0B4J1K2 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav9-4A0A0B4J1K2 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav9-4A0A0B4J1K2 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav9-4A0A0B4J1K2 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms