Protein–RNA interactions for Protein: A0A0A6YY83

Pcdh7, Protocadherin 7, mousemouse

Predictions only

Length 1,255 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh7A0A0A6YY83 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC19.35■□□□□ 0.69
Pcdh7A0A0A6YY83 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdh7A0A0A6YY83 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC19.35■□□□□ 0.69
Pcdh7A0A0A6YY83 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC19.35■□□□□ 0.69
Pcdh7A0A0A6YY83 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.35■□□□□ 0.69
Pcdh7A0A0A6YY83 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdh7A0A0A6YY83 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdh7A0A0A6YY83 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdh7A0A0A6YY83 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.35■□□□□ 0.69
Pcdh7A0A0A6YY83 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdh7A0A0A6YY83 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Pcdh7A0A0A6YY83 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdh7A0A0A6YY83 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdh7A0A0A6YY83 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdh7A0A0A6YY83 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdh7A0A0A6YY83 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdh7A0A0A6YY83 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdh7A0A0A6YY83 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdh7A0A0A6YY83 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdh7A0A0A6YY83 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdh7A0A0A6YY83 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.34■□□□□ 0.69
Pcdh7A0A0A6YY83 Gm8495-201ENSMUST00000188740 694 ntBASIC19.34■□□□□ 0.69
Pcdh7A0A0A6YY83 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdh7A0A0A6YY83 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdh7A0A0A6YY83 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.34■□□□□ 0.69
Pcdh7A0A0A6YY83 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdh7A0A0A6YY83 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdh7A0A0A6YY83 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdh7A0A0A6YY83 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdh7A0A0A6YY83 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdh7A0A0A6YY83 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdh7A0A0A6YY83 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdh7A0A0A6YY83 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdh7A0A0A6YY83 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Pcdh7A0A0A6YY83 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdh7A0A0A6YY83 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Pcdh7A0A0A6YY83 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdh7A0A0A6YY83 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdh7A0A0A6YY83 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdh7A0A0A6YY83 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
Pcdh7A0A0A6YY83 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdh7A0A0A6YY83 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdh7A0A0A6YY83 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdh7A0A0A6YY83 AV356131-201ENSMUST00000206201 750 ntBASIC19.32■□□□□ 0.68
Pcdh7A0A0A6YY83 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdh7A0A0A6YY83 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdh7A0A0A6YY83 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Pcdh7A0A0A6YY83 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdh7A0A0A6YY83 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Pcdh7A0A0A6YY83 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdh7A0A0A6YY83 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdh7A0A0A6YY83 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdh7A0A0A6YY83 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Pcdh7A0A0A6YY83 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Pcdh7A0A0A6YY83 Gm7514-201ENSMUST00000209475 934 ntBASIC19.31■□□□□ 0.68
Pcdh7A0A0A6YY83 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.31■□□□□ 0.68
Pcdh7A0A0A6YY83 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdh7A0A0A6YY83 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdh7A0A0A6YY83 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdh7A0A0A6YY83 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdh7A0A0A6YY83 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdh7A0A0A6YY83 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdh7A0A0A6YY83 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdh7A0A0A6YY83 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdh7A0A0A6YY83 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdh7A0A0A6YY83 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdh7A0A0A6YY83 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Pcdh7A0A0A6YY83 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdh7A0A0A6YY83 Gm10849-201ENSMUST00000100397 618 ntBASIC19.3■□□□□ 0.68
Pcdh7A0A0A6YY83 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC19.3■□□□□ 0.68
Pcdh7A0A0A6YY83 Golph3-205ENSMUST00000228671 2842 ntBASIC19.3■□□□□ 0.68
Pcdh7A0A0A6YY83 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdh7A0A0A6YY83 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdh7A0A0A6YY83 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdh7A0A0A6YY83 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Pcdh7A0A0A6YY83 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdh7A0A0A6YY83 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.29■□□□□ 0.68
Pcdh7A0A0A6YY83 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdh7A0A0A6YY83 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdh7A0A0A6YY83 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdh7A0A0A6YY83 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdh7A0A0A6YY83 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdh7A0A0A6YY83 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.29■□□□□ 0.68
Pcdh7A0A0A6YY83 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdh7A0A0A6YY83 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdh7A0A0A6YY83 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdh7A0A0A6YY83 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdh7A0A0A6YY83 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdh7A0A0A6YY83 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdh7A0A0A6YY83 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdh7A0A0A6YY83 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdh7A0A0A6YY83 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Pcdh7A0A0A6YY83 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdh7A0A0A6YY83 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC19.29■□□□□ 0.68
Pcdh7A0A0A6YY83 Gm15853-202ENSMUST00000195518 2041 ntBASIC19.29■□□□□ 0.68
Pcdh7A0A0A6YY83 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdh7A0A0A6YY83 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdh7A0A0A6YY83 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.28■□□□□ 0.68
Pcdh7A0A0A6YY83 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdh7A0A0A6YY83 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms