Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
Trbc1A0A0A6YWV4 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trbc1A0A0A6YWV4 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Trbc1A0A0A6YWV4 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC17.19■□□□□ 0.34
Trbc1A0A0A6YWV4 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.19■□□□□ 0.34
Trbc1A0A0A6YWV4 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC17.19■□□□□ 0.34
Trbc1A0A0A6YWV4 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC17.19■□□□□ 0.34
Trbc1A0A0A6YWV4 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trbc1A0A0A6YWV4 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.19■□□□□ 0.34
Trbc1A0A0A6YWV4 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trbc1A0A0A6YWV4 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trbc1A0A0A6YWV4 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trbc1A0A0A6YWV4 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trbc1A0A0A6YWV4 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC17.18■□□□□ 0.34
Trbc1A0A0A6YWV4 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.18■□□□□ 0.34
Trbc1A0A0A6YWV4 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trbc1A0A0A6YWV4 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trbc1A0A0A6YWV4 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trbc1A0A0A6YWV4 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.18■□□□□ 0.34
Trbc1A0A0A6YWV4 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trbc1A0A0A6YWV4 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trbc1A0A0A6YWV4 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trbc1A0A0A6YWV4 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trbc1A0A0A6YWV4 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trbc1A0A0A6YWV4 Gm7291-201ENSMUST00000199147 382 ntBASIC17.17■□□□□ 0.34
Trbc1A0A0A6YWV4 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trbc1A0A0A6YWV4 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trbc1A0A0A6YWV4 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trbc1A0A0A6YWV4 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Trbc1A0A0A6YWV4 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trbc1A0A0A6YWV4 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trbc1A0A0A6YWV4 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trbc1A0A0A6YWV4 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trbc1A0A0A6YWV4 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Trbc1A0A0A6YWV4 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC17.16■□□□□ 0.34
Trbc1A0A0A6YWV4 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Trbc1A0A0A6YWV4 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Trbc1A0A0A6YWV4 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trbc1A0A0A6YWV4 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trbc1A0A0A6YWV4 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trbc1A0A0A6YWV4 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Trbc1A0A0A6YWV4 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trbc1A0A0A6YWV4 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trbc1A0A0A6YWV4 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trbc1A0A0A6YWV4 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trbc1A0A0A6YWV4 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.16■□□□□ 0.34
Trbc1A0A0A6YWV4 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trbc1A0A0A6YWV4 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trbc1A0A0A6YWV4 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trbc1A0A0A6YWV4 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trbc1A0A0A6YWV4 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Trbc1A0A0A6YWV4 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Trbc1A0A0A6YWV4 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Trbc1A0A0A6YWV4 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trbc1A0A0A6YWV4 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trbc1A0A0A6YWV4 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.15■□□□□ 0.34
Trbc1A0A0A6YWV4 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trbc1A0A0A6YWV4 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Trbc1A0A0A6YWV4 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trbc1A0A0A6YWV4 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trbc1A0A0A6YWV4 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trbc1A0A0A6YWV4 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trbc1A0A0A6YWV4 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.14■□□□□ 0.33
Trbc1A0A0A6YWV4 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trbc1A0A0A6YWV4 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trbc1A0A0A6YWV4 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Trbc1A0A0A6YWV4 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trbc1A0A0A6YWV4 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Trbc1A0A0A6YWV4 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC17.14■□□□□ 0.33
Trbc1A0A0A6YWV4 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
Trbc1A0A0A6YWV4 AC164629.5-201ENSMUST00000220387 632 ntBASIC17.14■□□□□ 0.33
Trbc1A0A0A6YWV4 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trbc1A0A0A6YWV4 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trbc1A0A0A6YWV4 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trbc1A0A0A6YWV4 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trbc1A0A0A6YWV4 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trbc1A0A0A6YWV4 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trbc1A0A0A6YWV4 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trbc1A0A0A6YWV4 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Trbc1A0A0A6YWV4 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trbc1A0A0A6YWV4 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trbc1A0A0A6YWV4 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trbc1A0A0A6YWV4 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trbc1A0A0A6YWV4 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.13■□□□□ 0.33
Trbc1A0A0A6YWV4 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC17.13■□□□□ 0.33
Trbc1A0A0A6YWV4 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC17.13■□□□□ 0.33
Trbc1A0A0A6YWV4 Gm7514-201ENSMUST00000209475 934 ntBASIC17.13■□□□□ 0.33
Trbc1A0A0A6YWV4 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Trbc1A0A0A6YWV4 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trbc1A0A0A6YWV4 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trbc1A0A0A6YWV4 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trbc1A0A0A6YWV4 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trbc1A0A0A6YWV4 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trbc1A0A0A6YWV4 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trbc1A0A0A6YWV4 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trbc1A0A0A6YWV4 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trbc1A0A0A6YWV4 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.12■□□□□ 0.33
Trbc1A0A0A6YWV4 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trbc1A0A0A6YWV4 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.12■□□□□ 0.33
Trbc1A0A0A6YWV4 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms