Protein–RNA interactions for Protein: A0A075B6B5

Trav6-5, T cell receptor alpha variable 6-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-5A0A075B6B5 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC14.54□□□□□ -0.08
Trav6-5A0A075B6B5 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC14.54□□□□□ -0.08
Trav6-5A0A075B6B5 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Trav6-5A0A075B6B5 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
Trav6-5A0A075B6B5 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6-5A0A075B6B5 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6-5A0A075B6B5 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6-5A0A075B6B5 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6-5A0A075B6B5 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6-5A0A075B6B5 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC14.54□□□□□ -0.08
Trav6-5A0A075B6B5 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Trav6-5A0A075B6B5 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6-5A0A075B6B5 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6-5A0A075B6B5 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
Trav6-5A0A075B6B5 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Trav6-5A0A075B6B5 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6-5A0A075B6B5 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6-5A0A075B6B5 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6-5A0A075B6B5 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6-5A0A075B6B5 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
Trav6-5A0A075B6B5 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Trav6-5A0A075B6B5 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6-5A0A075B6B5 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6-5A0A075B6B5 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6-5A0A075B6B5 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
Trav6-5A0A075B6B5 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6-5A0A075B6B5 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6-5A0A075B6B5 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6-5A0A075B6B5 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Trav6-5A0A075B6B5 Gm5828-201ENSMUST00000071842 1860 ntBASIC14.52□□□□□ -0.08
Trav6-5A0A075B6B5 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Trav6-5A0A075B6B5 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav6-5A0A075B6B5 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC14.52□□□□□ -0.08
Trav6-5A0A075B6B5 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav6-5A0A075B6B5 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav6-5A0A075B6B5 Gm40881-201ENSMUST00000223397 166 ntBASIC14.52□□□□□ -0.09
Trav6-5A0A075B6B5 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
Trav6-5A0A075B6B5 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Trav6-5A0A075B6B5 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav6-5A0A075B6B5 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav6-5A0A075B6B5 Fst-202ENSMUST00000223640 2612 ntBASIC14.52□□□□□ -0.09
Trav6-5A0A075B6B5 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav6-5A0A075B6B5 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav6-5A0A075B6B5 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav6-5A0A075B6B5 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav6-5A0A075B6B5 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav6-5A0A075B6B5 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Trav6-5A0A075B6B5 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6-5A0A075B6B5 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Trav6-5A0A075B6B5 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6-5A0A075B6B5 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6-5A0A075B6B5 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6-5A0A075B6B5 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6-5A0A075B6B5 Gm45906-201ENSMUST00000208911 1430 ntBASIC14.51□□□□□ -0.09
Trav6-5A0A075B6B5 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6-5A0A075B6B5 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6-5A0A075B6B5 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6-5A0A075B6B5 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6-5A0A075B6B5 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6-5A0A075B6B5 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6-5A0A075B6B5 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6-5A0A075B6B5 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Trav6-5A0A075B6B5 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC14.51□□□□□ -0.09
Trav6-5A0A075B6B5 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6-5A0A075B6B5 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6-5A0A075B6B5 Gm5898-201ENSMUST00000121016 2071 ntBASIC14.51□□□□□ -0.09
Trav6-5A0A075B6B5 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6-5A0A075B6B5 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6-5A0A075B6B5 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC14.51□□□□□ -0.09
Trav6-5A0A075B6B5 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6-5A0A075B6B5 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6-5A0A075B6B5 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6-5A0A075B6B5 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6-5A0A075B6B5 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6-5A0A075B6B5 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6-5A0A075B6B5 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6-5A0A075B6B5 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6-5A0A075B6B5 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6-5A0A075B6B5 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6-5A0A075B6B5 Gm10232-201ENSMUST00000089221 720 ntBASIC14.5□□□□□ -0.09
Trav6-5A0A075B6B5 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6-5A0A075B6B5 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
Trav6-5A0A075B6B5 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Trav6-5A0A075B6B5 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6-5A0A075B6B5 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6-5A0A075B6B5 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6-5A0A075B6B5 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6-5A0A075B6B5 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6-5A0A075B6B5 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6-5A0A075B6B5 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6-5A0A075B6B5 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6-5A0A075B6B5 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6-5A0A075B6B5 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6-5A0A075B6B5 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6-5A0A075B6B5 Gm43566-201ENSMUST00000196851 808 ntBASIC14.49□□□□□ -0.09
Trav6-5A0A075B6B5 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6-5A0A075B6B5 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6-5A0A075B6B5 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6-5A0A075B6B5 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6-5A0A075B6B5 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC14.49□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 91 ms