Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Trav16d-dv11A0A075B617 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav16d-dv11A0A075B617 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav16d-dv11A0A075B617 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav16d-dv11A0A075B617 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav16d-dv11A0A075B617 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav16d-dv11A0A075B617 Gm43530-201ENSMUST00000195920 274 ntBASIC13.8□□□□□ -0.2
Trav16d-dv11A0A075B617 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav16d-dv11A0A075B617 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav16d-dv11A0A075B617 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav16d-dv11A0A075B617 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav16d-dv11A0A075B617 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav16d-dv11A0A075B617 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav16d-dv11A0A075B617 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC13.8□□□□□ -0.2
Trav16d-dv11A0A075B617 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav16d-dv11A0A075B617 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Trav16d-dv11A0A075B617 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav16d-dv11A0A075B617 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Trav16d-dv11A0A075B617 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav16d-dv11A0A075B617 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC13.79□□□□□ -0.2
Trav16d-dv11A0A075B617 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav16d-dv11A0A075B617 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav16d-dv11A0A075B617 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav16d-dv11A0A075B617 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Trav16d-dv11A0A075B617 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav16d-dv11A0A075B617 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav16d-dv11A0A075B617 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav16d-dv11A0A075B617 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav16d-dv11A0A075B617 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav16d-dv11A0A075B617 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav16d-dv11A0A075B617 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav16d-dv11A0A075B617 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav16d-dv11A0A075B617 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC13.78□□□□□ -0.2
Trav16d-dv11A0A075B617 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav16d-dv11A0A075B617 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav16d-dv11A0A075B617 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav16d-dv11A0A075B617 Gm15853-202ENSMUST00000195518 2041 ntBASIC13.78□□□□□ -0.2
Trav16d-dv11A0A075B617 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav16d-dv11A0A075B617 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav16d-dv11A0A075B617 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav16d-dv11A0A075B617 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav16d-dv11A0A075B617 Gm45444-201ENSMUST00000211394 898 ntBASIC13.78□□□□□ -0.2
Trav16d-dv11A0A075B617 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav16d-dv11A0A075B617 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC13.78□□□□□ -0.2
Trav16d-dv11A0A075B617 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav16d-dv11A0A075B617 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav16d-dv11A0A075B617 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav16d-dv11A0A075B617 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav16d-dv11A0A075B617 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav16d-dv11A0A075B617 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav16d-dv11A0A075B617 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav16d-dv11A0A075B617 Dmtn-207ENSMUST00000228001 2437 ntBASIC13.78□□□□□ -0.2
Trav16d-dv11A0A075B617 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav16d-dv11A0A075B617 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trav16d-dv11A0A075B617 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC13.77□□□□□ -0.21
Trav16d-dv11A0A075B617 Gm12366-201ENSMUST00000121722 873 ntBASIC13.77□□□□□ -0.21
Trav16d-dv11A0A075B617 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC13.77□□□□□ -0.21
Trav16d-dv11A0A075B617 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
Trav16d-dv11A0A075B617 Gm5067-201ENSMUST00000170449 1009 ntBASIC13.77□□□□□ -0.21
Trav16d-dv11A0A075B617 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Trav16d-dv11A0A075B617 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav16d-dv11A0A075B617 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav16d-dv11A0A075B617 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trav16d-dv11A0A075B617 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trav16d-dv11A0A075B617 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav16d-dv11A0A075B617 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC13.77□□□□□ -0.21
Trav16d-dv11A0A075B617 Gm5786-201ENSMUST00000085368 882 ntBASIC13.77□□□□□ -0.21
Trav16d-dv11A0A075B617 Gm10571-201ENSMUST00000097869 1638 ntBASIC13.77□□□□□ -0.21
Trav16d-dv11A0A075B617 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC13.77□□□□□ -0.21
Trav16d-dv11A0A075B617 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC13.76□□□□□ -0.21
Trav16d-dv11A0A075B617 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav16d-dv11A0A075B617 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav16d-dv11A0A075B617 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav16d-dv11A0A075B617 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav16d-dv11A0A075B617 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav16d-dv11A0A075B617 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav16d-dv11A0A075B617 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav16d-dv11A0A075B617 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav16d-dv11A0A075B617 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav16d-dv11A0A075B617 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav16d-dv11A0A075B617 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC13.76□□□□□ -0.21
Trav16d-dv11A0A075B617 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav16d-dv11A0A075B617 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav16d-dv11A0A075B617 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav16d-dv11A0A075B617 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Trav16d-dv11A0A075B617 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Trav16d-dv11A0A075B617 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav16d-dv11A0A075B617 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
Trav16d-dv11A0A075B617 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav16d-dv11A0A075B617 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav16d-dv11A0A075B617 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav16d-dv11A0A075B617 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Trav16d-dv11A0A075B617 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Trav16d-dv11A0A075B617 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav16d-dv11A0A075B617 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav16d-dv11A0A075B617 AC123834.2-201ENSMUST00000224038 2340 ntBASIC13.75□□□□□ -0.21
Trav16d-dv11A0A075B617 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Trav16d-dv11A0A075B617 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav16d-dv11A0A075B617 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav16d-dv11A0A075B617 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms