Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav13d-1A0A075B606 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav13d-1A0A075B606 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav13d-1A0A075B606 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav13d-1A0A075B606 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav13d-1A0A075B606 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
Trav13d-1A0A075B606 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav13d-1A0A075B606 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav13d-1A0A075B606 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav13d-1A0A075B606 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav13d-1A0A075B606 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav13d-1A0A075B606 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav13d-1A0A075B606 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav13d-1A0A075B606 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
Trav13d-1A0A075B606 Gm6802-201ENSMUST00000167843 1983 ntBASIC13.71□□□□□ -0.21
Trav13d-1A0A075B606 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
Trav13d-1A0A075B606 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav13d-1A0A075B606 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav13d-1A0A075B606 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav13d-1A0A075B606 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trav13d-1A0A075B606 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Trav13d-1A0A075B606 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Trav13d-1A0A075B606 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav13d-1A0A075B606 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav13d-1A0A075B606 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav13d-1A0A075B606 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav13d-1A0A075B606 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC13.71□□□□□ -0.22
Trav13d-1A0A075B606 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
Trav13d-1A0A075B606 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav13d-1A0A075B606 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav13d-1A0A075B606 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav13d-1A0A075B606 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC13.7□□□□□ -0.22
Trav13d-1A0A075B606 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav13d-1A0A075B606 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav13d-1A0A075B606 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav13d-1A0A075B606 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav13d-1A0A075B606 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav13d-1A0A075B606 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav13d-1A0A075B606 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav13d-1A0A075B606 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav13d-1A0A075B606 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav13d-1A0A075B606 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav13d-1A0A075B606 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav13d-1A0A075B606 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav13d-1A0A075B606 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav13d-1A0A075B606 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav13d-1A0A075B606 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Trav13d-1A0A075B606 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav13d-1A0A075B606 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav13d-1A0A075B606 Golph3-205ENSMUST00000228671 2842 ntBASIC13.7□□□□□ -0.22
Trav13d-1A0A075B606 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav13d-1A0A075B606 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav13d-1A0A075B606 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Trav13d-1A0A075B606 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav13d-1A0A075B606 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Trav13d-1A0A075B606 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav13d-1A0A075B606 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav13d-1A0A075B606 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav13d-1A0A075B606 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Trav13d-1A0A075B606 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav13d-1A0A075B606 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC13.69□□□□□ -0.22
Trav13d-1A0A075B606 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC13.69□□□□□ -0.22
Trav13d-1A0A075B606 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav13d-1A0A075B606 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav13d-1A0A075B606 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav13d-1A0A075B606 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav13d-1A0A075B606 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav13d-1A0A075B606 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav13d-1A0A075B606 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Trav13d-1A0A075B606 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav13d-1A0A075B606 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
Trav13d-1A0A075B606 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav13d-1A0A075B606 Gm12933-201ENSMUST00000120203 872 ntBASIC13.68□□□□□ -0.22
Trav13d-1A0A075B606 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC13.68□□□□□ -0.22
Trav13d-1A0A075B606 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC13.68□□□□□ -0.22
Trav13d-1A0A075B606 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC13.68□□□□□ -0.22
Trav13d-1A0A075B606 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav13d-1A0A075B606 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav13d-1A0A075B606 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav13d-1A0A075B606 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav13d-1A0A075B606 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Trav13d-1A0A075B606 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Trav13d-1A0A075B606 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav13d-1A0A075B606 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC13.67□□□□□ -0.22
Trav13d-1A0A075B606 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav13d-1A0A075B606 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav13d-1A0A075B606 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav13d-1A0A075B606 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav13d-1A0A075B606 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav13d-1A0A075B606 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav13d-1A0A075B606 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav13d-1A0A075B606 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Trav13d-1A0A075B606 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC13.67□□□□□ -0.22
Trav13d-1A0A075B606 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC13.67□□□□□ -0.22
Trav13d-1A0A075B606 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
Trav13d-1A0A075B606 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
Trav13d-1A0A075B606 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav13d-1A0A075B606 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav13d-1A0A075B606 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC13.67□□□□□ -0.22
Trav13d-1A0A075B606 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms