Protein–RNA interactions for Protein: Q9Z2C6

Upk1b, Uroplakin-1b, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1bQ9Z2C6 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.45■□□□□ 0.38
Upk1bQ9Z2C6 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Upk1bQ9Z2C6 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Upk1bQ9Z2C6 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Upk1bQ9Z2C6 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Upk1bQ9Z2C6 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
Upk1bQ9Z2C6 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Upk1bQ9Z2C6 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Upk1bQ9Z2C6 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Upk1bQ9Z2C6 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Upk1bQ9Z2C6 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.44■□□□□ 0.38
Upk1bQ9Z2C6 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Upk1bQ9Z2C6 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Upk1bQ9Z2C6 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Upk1bQ9Z2C6 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Upk1bQ9Z2C6 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Upk1bQ9Z2C6 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Upk1bQ9Z2C6 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC17.44■□□□□ 0.38
Upk1bQ9Z2C6 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Upk1bQ9Z2C6 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC17.44■□□□□ 0.38
Upk1bQ9Z2C6 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Upk1bQ9Z2C6 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Upk1bQ9Z2C6 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Upk1bQ9Z2C6 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Upk1bQ9Z2C6 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Upk1bQ9Z2C6 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Upk1bQ9Z2C6 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Upk1bQ9Z2C6 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Upk1bQ9Z2C6 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Upk1bQ9Z2C6 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Upk1bQ9Z2C6 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Upk1bQ9Z2C6 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC17.43■□□□□ 0.38
Upk1bQ9Z2C6 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Upk1bQ9Z2C6 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Upk1bQ9Z2C6 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Upk1bQ9Z2C6 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Upk1bQ9Z2C6 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Upk1bQ9Z2C6 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Upk1bQ9Z2C6 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Upk1bQ9Z2C6 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Upk1bQ9Z2C6 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Upk1bQ9Z2C6 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Upk1bQ9Z2C6 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Upk1bQ9Z2C6 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Upk1bQ9Z2C6 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Upk1bQ9Z2C6 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC17.42■□□□□ 0.38
Upk1bQ9Z2C6 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Upk1bQ9Z2C6 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Upk1bQ9Z2C6 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Upk1bQ9Z2C6 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Upk1bQ9Z2C6 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Upk1bQ9Z2C6 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Upk1bQ9Z2C6 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.42■□□□□ 0.38
Upk1bQ9Z2C6 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Upk1bQ9Z2C6 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.42■□□□□ 0.38
Upk1bQ9Z2C6 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Upk1bQ9Z2C6 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Upk1bQ9Z2C6 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Upk1bQ9Z2C6 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Upk1bQ9Z2C6 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Upk1bQ9Z2C6 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Upk1bQ9Z2C6 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Upk1bQ9Z2C6 Gm22238-201ENSMUST00000175222 88 ntBASIC17.41■□□□□ 0.38
Upk1bQ9Z2C6 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Upk1bQ9Z2C6 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC17.41■□□□□ 0.38
Upk1bQ9Z2C6 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
Upk1bQ9Z2C6 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Upk1bQ9Z2C6 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Upk1bQ9Z2C6 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Upk1bQ9Z2C6 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Upk1bQ9Z2C6 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Upk1bQ9Z2C6 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Upk1bQ9Z2C6 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Upk1bQ9Z2C6 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.41■□□□□ 0.38
Upk1bQ9Z2C6 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.4■□□□□ 0.38
Upk1bQ9Z2C6 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Upk1bQ9Z2C6 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Upk1bQ9Z2C6 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Upk1bQ9Z2C6 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.4■□□□□ 0.38
Upk1bQ9Z2C6 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Upk1bQ9Z2C6 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Upk1bQ9Z2C6 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.4■□□□□ 0.38
Upk1bQ9Z2C6 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Upk1bQ9Z2C6 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Upk1bQ9Z2C6 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Upk1bQ9Z2C6 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Upk1bQ9Z2C6 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Upk1bQ9Z2C6 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Upk1bQ9Z2C6 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Upk1bQ9Z2C6 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Upk1bQ9Z2C6 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.4■□□□□ 0.38
Upk1bQ9Z2C6 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Upk1bQ9Z2C6 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Upk1bQ9Z2C6 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Upk1bQ9Z2C6 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Upk1bQ9Z2C6 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Upk1bQ9Z2C6 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Upk1bQ9Z2C6 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Upk1bQ9Z2C6 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Upk1bQ9Z2C6 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms