Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
BRF2Q9HAW0 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
BRF2Q9HAW0 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.43■□□□□ 0.86
BRF2Q9HAW0 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.43■□□□□ 0.86
BRF2Q9HAW0 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
BRF2Q9HAW0 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
BRF2Q9HAW0 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.42■□□□□ 0.86
BRF2Q9HAW0 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
BRF2Q9HAW0 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
BRF2Q9HAW0 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.42■□□□□ 0.86
BRF2Q9HAW0 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.42■□□□□ 0.86
BRF2Q9HAW0 RASA4CP-201ENST00000424092 1398 ntBASIC20.42■□□□□ 0.86
BRF2Q9HAW0 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
BRF2Q9HAW0 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.42■□□□□ 0.86
BRF2Q9HAW0 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
BRF2Q9HAW0 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
BRF2Q9HAW0 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
BRF2Q9HAW0 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
BRF2Q9HAW0 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
BRF2Q9HAW0 MIR939-201ENST00000401314 82 ntBASIC20.41■□□□□ 0.86
BRF2Q9HAW0 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.41■□□□□ 0.86
BRF2Q9HAW0 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.41■□□□□ 0.86
BRF2Q9HAW0 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.41■□□□□ 0.86
BRF2Q9HAW0 TSPY26P-201ENST00000476365 1326 ntBASIC20.41■□□□□ 0.86
BRF2Q9HAW0 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
BRF2Q9HAW0 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
BRF2Q9HAW0 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
BRF2Q9HAW0 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
BRF2Q9HAW0 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.41■□□□□ 0.86
BRF2Q9HAW0 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
BRF2Q9HAW0 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
BRF2Q9HAW0 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
BRF2Q9HAW0 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
BRF2Q9HAW0 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.41■□□□□ 0.86
BRF2Q9HAW0 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
BRF2Q9HAW0 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
BRF2Q9HAW0 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
BRF2Q9HAW0 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
BRF2Q9HAW0 AC009237.3-201ENST00000393279 1427 ntBASIC20.4■□□□□ 0.86
BRF2Q9HAW0 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
BRF2Q9HAW0 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.4■□□□□ 0.86
BRF2Q9HAW0 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
BRF2Q9HAW0 AC091305.1-201ENST00000479476 895 ntBASIC20.4■□□□□ 0.86
BRF2Q9HAW0 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
BRF2Q9HAW0 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
BRF2Q9HAW0 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
BRF2Q9HAW0 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
BRF2Q9HAW0 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
BRF2Q9HAW0 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.39■□□□□ 0.86
BRF2Q9HAW0 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.39■□□□□ 0.86
BRF2Q9HAW0 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
BRF2Q9HAW0 AL137060.1-201ENST00000618151 2648 ntBASIC20.39■□□□□ 0.85
BRF2Q9HAW0 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
BRF2Q9HAW0 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
BRF2Q9HAW0 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.39■□□□□ 0.85
BRF2Q9HAW0 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.39■□□□□ 0.85
BRF2Q9HAW0 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
BRF2Q9HAW0 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.39■□□□□ 0.85
BRF2Q9HAW0 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
BRF2Q9HAW0 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
BRF2Q9HAW0 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
BRF2Q9HAW0 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
BRF2Q9HAW0 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
BRF2Q9HAW0 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
BRF2Q9HAW0 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
BRF2Q9HAW0 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
BRF2Q9HAW0 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.38■□□□□ 0.85
BRF2Q9HAW0 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.38■□□□□ 0.85
BRF2Q9HAW0 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.38■□□□□ 0.85
BRF2Q9HAW0 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
BRF2Q9HAW0 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.38■□□□□ 0.85
BRF2Q9HAW0 AF213884.3-201ENST00000563833 479 ntBASIC20.38■□□□□ 0.85
BRF2Q9HAW0 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.38■□□□□ 0.85
BRF2Q9HAW0 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.38■□□□□ 0.85
BRF2Q9HAW0 AL031432.3-201ENST00000607698 485 ntBASIC20.38■□□□□ 0.85
BRF2Q9HAW0 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
BRF2Q9HAW0 AC105233.4-201ENST00000642045 216 ntBASIC20.38■□□□□ 0.85
BRF2Q9HAW0 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
BRF2Q9HAW0 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.38■□□□□ 0.85
BRF2Q9HAW0 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.38■□□□□ 0.85
BRF2Q9HAW0 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.38■□□□□ 0.85
BRF2Q9HAW0 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
BRF2Q9HAW0 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.38■□□□□ 0.85
BRF2Q9HAW0 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
BRF2Q9HAW0 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.38■□□□□ 0.85
BRF2Q9HAW0 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
BRF2Q9HAW0 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
BRF2Q9HAW0 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.37■□□□□ 0.85
BRF2Q9HAW0 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
BRF2Q9HAW0 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
BRF2Q9HAW0 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
BRF2Q9HAW0 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
BRF2Q9HAW0 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.37■□□□□ 0.85
BRF2Q9HAW0 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
BRF2Q9HAW0 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
BRF2Q9HAW0 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
BRF2Q9HAW0 MIR572-201ENST00000384983 95 ntBASIC20.37■□□□□ 0.85
BRF2Q9HAW0 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.37■□□□□ 0.85
BRF2Q9HAW0 AL136967.2-201ENST00000623968 743 ntBASIC20.37■□□□□ 0.85
BRF2Q9HAW0 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms