Protein–RNA interactions for Protein: Q9DC33

Hmg20a, High mobility group protein 20A, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20aQ9DC33 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hmg20aQ9DC33 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.2■□□□□ 0.34
Hmg20aQ9DC33 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hmg20aQ9DC33 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Hmg20aQ9DC33 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC17.2■□□□□ 0.34
Hmg20aQ9DC33 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC17.2■□□□□ 0.34
Hmg20aQ9DC33 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hmg20aQ9DC33 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hmg20aQ9DC33 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hmg20aQ9DC33 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hmg20aQ9DC33 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Hmg20aQ9DC33 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
Hmg20aQ9DC33 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
Hmg20aQ9DC33 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Hmg20aQ9DC33 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Hmg20aQ9DC33 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hmg20aQ9DC33 Cap2-205ENSMUST00000225824 1634 ntBASIC17.19■□□□□ 0.34
Hmg20aQ9DC33 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hmg20aQ9DC33 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hmg20aQ9DC33 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Hmg20aQ9DC33 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Hmg20aQ9DC33 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hmg20aQ9DC33 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hmg20aQ9DC33 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Hmg20aQ9DC33 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hmg20aQ9DC33 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.19■□□□□ 0.34
Hmg20aQ9DC33 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hmg20aQ9DC33 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Hmg20aQ9DC33 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Hmg20aQ9DC33 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hmg20aQ9DC33 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hmg20aQ9DC33 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Hmg20aQ9DC33 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Hmg20aQ9DC33 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Hmg20aQ9DC33 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC17.18■□□□□ 0.34
Hmg20aQ9DC33 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Hmg20aQ9DC33 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Hmg20aQ9DC33 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Hmg20aQ9DC33 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Hmg20aQ9DC33 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hmg20aQ9DC33 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hmg20aQ9DC33 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.18■□□□□ 0.34
Hmg20aQ9DC33 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hmg20aQ9DC33 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hmg20aQ9DC33 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.18■□□□□ 0.34
Hmg20aQ9DC33 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hmg20aQ9DC33 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hmg20aQ9DC33 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
Hmg20aQ9DC33 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC17.18■□□□□ 0.34
Hmg20aQ9DC33 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Hmg20aQ9DC33 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Hmg20aQ9DC33 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hmg20aQ9DC33 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Hmg20aQ9DC33 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC17.17■□□□□ 0.34
Hmg20aQ9DC33 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC17.17■□□□□ 0.34
Hmg20aQ9DC33 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC17.17■□□□□ 0.34
Hmg20aQ9DC33 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hmg20aQ9DC33 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hmg20aQ9DC33 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Hmg20aQ9DC33 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hmg20aQ9DC33 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hmg20aQ9DC33 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hmg20aQ9DC33 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC17.16■□□□□ 0.34
Hmg20aQ9DC33 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Hmg20aQ9DC33 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Hmg20aQ9DC33 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hmg20aQ9DC33 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.16■□□□□ 0.34
Hmg20aQ9DC33 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.16■□□□□ 0.34
Hmg20aQ9DC33 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hmg20aQ9DC33 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hmg20aQ9DC33 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Hmg20aQ9DC33 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Hmg20aQ9DC33 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Hmg20aQ9DC33 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hmg20aQ9DC33 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Hmg20aQ9DC33 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hmg20aQ9DC33 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.15■□□□□ 0.34
Hmg20aQ9DC33 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Hmg20aQ9DC33 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.15■□□□□ 0.34
Hmg20aQ9DC33 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hmg20aQ9DC33 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Hmg20aQ9DC33 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Hmg20aQ9DC33 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Hmg20aQ9DC33 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hmg20aQ9DC33 Gm45444-201ENSMUST00000211394 898 ntBASIC17.15■□□□□ 0.34
Hmg20aQ9DC33 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hmg20aQ9DC33 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Hmg20aQ9DC33 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hmg20aQ9DC33 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hmg20aQ9DC33 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hmg20aQ9DC33 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hmg20aQ9DC33 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Hmg20aQ9DC33 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Hmg20aQ9DC33 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.14■□□□□ 0.33
Hmg20aQ9DC33 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hmg20aQ9DC33 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hmg20aQ9DC33 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Hmg20aQ9DC33 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Hmg20aQ9DC33 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Hmg20aQ9DC33 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms