Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Chmp2aQ9DB34 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Chmp2aQ9DB34 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Chmp2aQ9DB34 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Chmp2aQ9DB34 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Chmp2aQ9DB34 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.59■□□□□ 0.73
Chmp2aQ9DB34 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.59■□□□□ 0.73
Chmp2aQ9DB34 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Chmp2aQ9DB34 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Chmp2aQ9DB34 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Chmp2aQ9DB34 Gm10849-201ENSMUST00000100397 618 ntBASIC19.59■□□□□ 0.73
Chmp2aQ9DB34 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Chmp2aQ9DB34 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.59■□□□□ 0.73
Chmp2aQ9DB34 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Chmp2aQ9DB34 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Chmp2aQ9DB34 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Chmp2aQ9DB34 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Chmp2aQ9DB34 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Chmp2aQ9DB34 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Chmp2aQ9DB34 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Chmp2aQ9DB34 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Chmp2aQ9DB34 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Chmp2aQ9DB34 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.58■□□□□ 0.72
Chmp2aQ9DB34 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Chmp2aQ9DB34 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.58■□□□□ 0.72
Chmp2aQ9DB34 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Chmp2aQ9DB34 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.57■□□□□ 0.72
Chmp2aQ9DB34 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Chmp2aQ9DB34 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Chmp2aQ9DB34 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Chmp2aQ9DB34 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.57■□□□□ 0.72
Chmp2aQ9DB34 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC19.57■□□□□ 0.72
Chmp2aQ9DB34 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Chmp2aQ9DB34 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.57■□□□□ 0.72
Chmp2aQ9DB34 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Chmp2aQ9DB34 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Chmp2aQ9DB34 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Chmp2aQ9DB34 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Chmp2aQ9DB34 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Chmp2aQ9DB34 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Chmp2aQ9DB34 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Chmp2aQ9DB34 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Chmp2aQ9DB34 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.56■□□□□ 0.72
Chmp2aQ9DB34 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Chmp2aQ9DB34 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Chmp2aQ9DB34 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Chmp2aQ9DB34 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Chmp2aQ9DB34 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Chmp2aQ9DB34 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Chmp2aQ9DB34 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Chmp2aQ9DB34 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.55■□□□□ 0.72
Chmp2aQ9DB34 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Chmp2aQ9DB34 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC19.55■□□□□ 0.72
Chmp2aQ9DB34 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
Chmp2aQ9DB34 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Chmp2aQ9DB34 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC19.55■□□□□ 0.72
Chmp2aQ9DB34 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.55■□□□□ 0.72
Chmp2aQ9DB34 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Chmp2aQ9DB34 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Chmp2aQ9DB34 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chmp2aQ9DB34 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chmp2aQ9DB34 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chmp2aQ9DB34 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Chmp2aQ9DB34 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.54■□□□□ 0.72
Chmp2aQ9DB34 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Chmp2aQ9DB34 Gm7514-201ENSMUST00000209475 934 ntBASIC19.54■□□□□ 0.72
Chmp2aQ9DB34 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chmp2aQ9DB34 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Chmp2aQ9DB34 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chmp2aQ9DB34 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Chmp2aQ9DB34 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chmp2aQ9DB34 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.54■□□□□ 0.72
Chmp2aQ9DB34 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chmp2aQ9DB34 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Chmp2aQ9DB34 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chmp2aQ9DB34 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chmp2aQ9DB34 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Chmp2aQ9DB34 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.53■□□□□ 0.72
Chmp2aQ9DB34 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Chmp2aQ9DB34 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC19.53■□□□□ 0.72
Chmp2aQ9DB34 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Chmp2aQ9DB34 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Chmp2aQ9DB34 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Chmp2aQ9DB34 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Chmp2aQ9DB34 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Chmp2aQ9DB34 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Chmp2aQ9DB34 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC19.52■□□□□ 0.72
Chmp2aQ9DB34 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Chmp2aQ9DB34 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Chmp2aQ9DB34 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Chmp2aQ9DB34 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Chmp2aQ9DB34 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Chmp2aQ9DB34 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Chmp2aQ9DB34 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Chmp2aQ9DB34 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Chmp2aQ9DB34 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
Chmp2aQ9DB34 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.51■□□□□ 0.71
Chmp2aQ9DB34 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chmp2aQ9DB34 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Chmp2aQ9DB34 Gm13146-201ENSMUST00000118508 780 ntBASIC19.51■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms