Protein–RNA interactions for Protein: Q9D9H3

Mbd3l1, Methyl-CpG-binding domain protein 3-like 1, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mbd3l1Q9D9H3 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Mbd3l1Q9D9H3 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Mbd3l1Q9D9H3 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Mbd3l1Q9D9H3 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Mbd3l1Q9D9H3 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Mbd3l1Q9D9H3 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Mbd3l1Q9D9H3 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC16.33■□□□□ 0.2
Mbd3l1Q9D9H3 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Mbd3l1Q9D9H3 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Mbd3l1Q9D9H3 Gm38308-201ENSMUST00000194934 1809 ntBASIC16.33■□□□□ 0.2
Mbd3l1Q9D9H3 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Mbd3l1Q9D9H3 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Mbd3l1Q9D9H3 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC16.32■□□□□ 0.2
Mbd3l1Q9D9H3 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Mbd3l1Q9D9H3 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Mbd3l1Q9D9H3 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Mbd3l1Q9D9H3 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Mbd3l1Q9D9H3 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Mbd3l1Q9D9H3 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Mbd3l1Q9D9H3 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Mbd3l1Q9D9H3 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.32■□□□□ 0.2
Mbd3l1Q9D9H3 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Mbd3l1Q9D9H3 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Mbd3l1Q9D9H3 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Mbd3l1Q9D9H3 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC16.31■□□□□ 0.2
Mbd3l1Q9D9H3 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Mbd3l1Q9D9H3 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Mbd3l1Q9D9H3 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.31■□□□□ 0.2
Mbd3l1Q9D9H3 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Mbd3l1Q9D9H3 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Mbd3l1Q9D9H3 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Mbd3l1Q9D9H3 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Mbd3l1Q9D9H3 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Mbd3l1Q9D9H3 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Mbd3l1Q9D9H3 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Mbd3l1Q9D9H3 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Mbd3l1Q9D9H3 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Mbd3l1Q9D9H3 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Mbd3l1Q9D9H3 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC16.31■□□□□ 0.2
Mbd3l1Q9D9H3 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Mbd3l1Q9D9H3 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Mbd3l1Q9D9H3 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Mbd3l1Q9D9H3 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Mbd3l1Q9D9H3 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Mbd3l1Q9D9H3 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Mbd3l1Q9D9H3 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Mbd3l1Q9D9H3 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Mbd3l1Q9D9H3 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC16.3■□□□□ 0.2
Mbd3l1Q9D9H3 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Mbd3l1Q9D9H3 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Mbd3l1Q9D9H3 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Mbd3l1Q9D9H3 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Mbd3l1Q9D9H3 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Mbd3l1Q9D9H3 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Mbd3l1Q9D9H3 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Mbd3l1Q9D9H3 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Mbd3l1Q9D9H3 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Mbd3l1Q9D9H3 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Mbd3l1Q9D9H3 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Mbd3l1Q9D9H3 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Mbd3l1Q9D9H3 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Mbd3l1Q9D9H3 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Mbd3l1Q9D9H3 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Mbd3l1Q9D9H3 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Mbd3l1Q9D9H3 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Mbd3l1Q9D9H3 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Mbd3l1Q9D9H3 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Mbd3l1Q9D9H3 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
Mbd3l1Q9D9H3 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Mbd3l1Q9D9H3 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Mbd3l1Q9D9H3 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Mbd3l1Q9D9H3 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Mbd3l1Q9D9H3 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Mbd3l1Q9D9H3 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Mbd3l1Q9D9H3 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.28■□□□□ 0.2
Mbd3l1Q9D9H3 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Mbd3l1Q9D9H3 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Mbd3l1Q9D9H3 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Mbd3l1Q9D9H3 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC16.28■□□□□ 0.2
Mbd3l1Q9D9H3 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Mbd3l1Q9D9H3 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Mbd3l1Q9D9H3 Gm7292-201ENSMUST00000194706 2527 ntBASIC16.28■□□□□ 0.2
Mbd3l1Q9D9H3 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Mbd3l1Q9D9H3 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Mbd3l1Q9D9H3 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Mbd3l1Q9D9H3 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Mbd3l1Q9D9H3 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Mbd3l1Q9D9H3 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Mbd3l1Q9D9H3 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Mbd3l1Q9D9H3 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Mbd3l1Q9D9H3 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Mbd3l1Q9D9H3 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Mbd3l1Q9D9H3 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Mbd3l1Q9D9H3 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Mbd3l1Q9D9H3 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Mbd3l1Q9D9H3 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Mbd3l1Q9D9H3 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Mbd3l1Q9D9H3 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Mbd3l1Q9D9H3 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Mbd3l1Q9D9H3 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 574.5 ms