Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim42Q9D2H5 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim42Q9D2H5 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim42Q9D2H5 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim42Q9D2H5 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim42Q9D2H5 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trim42Q9D2H5 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim42Q9D2H5 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim42Q9D2H5 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim42Q9D2H5 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim42Q9D2H5 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trim42Q9D2H5 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC18.78■□□□□ 0.6
Trim42Q9D2H5 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim42Q9D2H5 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trim42Q9D2H5 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.78■□□□□ 0.6
Trim42Q9D2H5 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trim42Q9D2H5 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC18.78■□□□□ 0.6
Trim42Q9D2H5 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim42Q9D2H5 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trim42Q9D2H5 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.78■□□□□ 0.6
Trim42Q9D2H5 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.78■□□□□ 0.6
Trim42Q9D2H5 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim42Q9D2H5 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim42Q9D2H5 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trim42Q9D2H5 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim42Q9D2H5 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trim42Q9D2H5 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Trim42Q9D2H5 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim42Q9D2H5 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim42Q9D2H5 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim42Q9D2H5 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Trim42Q9D2H5 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim42Q9D2H5 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Trim42Q9D2H5 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.77■□□□□ 0.59
Trim42Q9D2H5 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Trim42Q9D2H5 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.76■□□□□ 0.59
Trim42Q9D2H5 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim42Q9D2H5 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim42Q9D2H5 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim42Q9D2H5 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim42Q9D2H5 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim42Q9D2H5 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim42Q9D2H5 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.76■□□□□ 0.59
Trim42Q9D2H5 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC18.76■□□□□ 0.59
Trim42Q9D2H5 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim42Q9D2H5 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim42Q9D2H5 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Trim42Q9D2H5 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim42Q9D2H5 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim42Q9D2H5 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.75■□□□□ 0.59
Trim42Q9D2H5 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Trim42Q9D2H5 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Trim42Q9D2H5 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim42Q9D2H5 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim42Q9D2H5 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim42Q9D2H5 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim42Q9D2H5 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Trim42Q9D2H5 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim42Q9D2H5 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim42Q9D2H5 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim42Q9D2H5 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim42Q9D2H5 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim42Q9D2H5 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trim42Q9D2H5 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.74■□□□□ 0.59
Trim42Q9D2H5 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim42Q9D2H5 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim42Q9D2H5 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim42Q9D2H5 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim42Q9D2H5 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC18.74■□□□□ 0.59
Trim42Q9D2H5 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Trim42Q9D2H5 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim42Q9D2H5 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim42Q9D2H5 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim42Q9D2H5 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trim42Q9D2H5 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trim42Q9D2H5 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim42Q9D2H5 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim42Q9D2H5 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Trim42Q9D2H5 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim42Q9D2H5 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.73■□□□□ 0.59
Trim42Q9D2H5 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim42Q9D2H5 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trim42Q9D2H5 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim42Q9D2H5 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trim42Q9D2H5 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim42Q9D2H5 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Trim42Q9D2H5 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim42Q9D2H5 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim42Q9D2H5 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim42Q9D2H5 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim42Q9D2H5 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim42Q9D2H5 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC18.73■□□□□ 0.59
Trim42Q9D2H5 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim42Q9D2H5 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim42Q9D2H5 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trim42Q9D2H5 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim42Q9D2H5 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim42Q9D2H5 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim42Q9D2H5 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim42Q9D2H5 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms