Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Chaf1bQ9D0N7 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Chaf1bQ9D0N7 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chaf1bQ9D0N7 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Chaf1bQ9D0N7 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chaf1bQ9D0N7 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chaf1bQ9D0N7 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Chaf1bQ9D0N7 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Chaf1bQ9D0N7 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chaf1bQ9D0N7 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Chaf1bQ9D0N7 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chaf1bQ9D0N7 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chaf1bQ9D0N7 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chaf1bQ9D0N7 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chaf1bQ9D0N7 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chaf1bQ9D0N7 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC17.68■□□□□ 0.42
Chaf1bQ9D0N7 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Chaf1bQ9D0N7 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Chaf1bQ9D0N7 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chaf1bQ9D0N7 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chaf1bQ9D0N7 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chaf1bQ9D0N7 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chaf1bQ9D0N7 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chaf1bQ9D0N7 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chaf1bQ9D0N7 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chaf1bQ9D0N7 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chaf1bQ9D0N7 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chaf1bQ9D0N7 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.67■□□□□ 0.42
Chaf1bQ9D0N7 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Chaf1bQ9D0N7 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Chaf1bQ9D0N7 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chaf1bQ9D0N7 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chaf1bQ9D0N7 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chaf1bQ9D0N7 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chaf1bQ9D0N7 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chaf1bQ9D0N7 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chaf1bQ9D0N7 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chaf1bQ9D0N7 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chaf1bQ9D0N7 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chaf1bQ9D0N7 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Chaf1bQ9D0N7 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chaf1bQ9D0N7 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Chaf1bQ9D0N7 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chaf1bQ9D0N7 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chaf1bQ9D0N7 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chaf1bQ9D0N7 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chaf1bQ9D0N7 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chaf1bQ9D0N7 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Chaf1bQ9D0N7 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chaf1bQ9D0N7 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chaf1bQ9D0N7 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chaf1bQ9D0N7 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Chaf1bQ9D0N7 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chaf1bQ9D0N7 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.65■□□□□ 0.42
Chaf1bQ9D0N7 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.65■□□□□ 0.42
Chaf1bQ9D0N7 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Chaf1bQ9D0N7 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chaf1bQ9D0N7 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chaf1bQ9D0N7 Gm8770-201ENSMUST00000121113 1109 ntBASIC17.65■□□□□ 0.42
Chaf1bQ9D0N7 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chaf1bQ9D0N7 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Chaf1bQ9D0N7 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chaf1bQ9D0N7 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chaf1bQ9D0N7 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chaf1bQ9D0N7 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chaf1bQ9D0N7 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.65■□□□□ 0.42
Chaf1bQ9D0N7 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.65■□□□□ 0.42
Chaf1bQ9D0N7 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Chaf1bQ9D0N7 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
Chaf1bQ9D0N7 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.64■□□□□ 0.42
Chaf1bQ9D0N7 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chaf1bQ9D0N7 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chaf1bQ9D0N7 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chaf1bQ9D0N7 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Chaf1bQ9D0N7 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.64■□□□□ 0.41
Chaf1bQ9D0N7 Gm5522-201ENSMUST00000189483 1242 ntBASIC17.64■□□□□ 0.41
Chaf1bQ9D0N7 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC17.64■□□□□ 0.41
Chaf1bQ9D0N7 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chaf1bQ9D0N7 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Chaf1bQ9D0N7 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chaf1bQ9D0N7 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chaf1bQ9D0N7 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.64■□□□□ 0.41
Chaf1bQ9D0N7 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chaf1bQ9D0N7 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chaf1bQ9D0N7 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
Chaf1bQ9D0N7 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Chaf1bQ9D0N7 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Chaf1bQ9D0N7 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chaf1bQ9D0N7 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Chaf1bQ9D0N7 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.63■□□□□ 0.41
Chaf1bQ9D0N7 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Chaf1bQ9D0N7 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chaf1bQ9D0N7 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC17.63■□□□□ 0.41
Chaf1bQ9D0N7 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Chaf1bQ9D0N7 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chaf1bQ9D0N7 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chaf1bQ9D0N7 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chaf1bQ9D0N7 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chaf1bQ9D0N7 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chaf1bQ9D0N7 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 12 ms