Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Khdc3Q9CWU5 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Khdc3Q9CWU5 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Khdc3Q9CWU5 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Khdc3Q9CWU5 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Khdc3Q9CWU5 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Khdc3Q9CWU5 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Khdc3Q9CWU5 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.03■□□□□ 0.48
Khdc3Q9CWU5 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Khdc3Q9CWU5 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Khdc3Q9CWU5 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Khdc3Q9CWU5 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.03■□□□□ 0.48
Khdc3Q9CWU5 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Khdc3Q9CWU5 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Khdc3Q9CWU5 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Khdc3Q9CWU5 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Khdc3Q9CWU5 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Khdc3Q9CWU5 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Khdc3Q9CWU5 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Khdc3Q9CWU5 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Khdc3Q9CWU5 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Khdc3Q9CWU5 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.48
Khdc3Q9CWU5 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Khdc3Q9CWU5 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
Khdc3Q9CWU5 Gm7860-201ENSMUST00000121190 879 ntBASIC18.02■□□□□ 0.48
Khdc3Q9CWU5 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Khdc3Q9CWU5 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Khdc3Q9CWU5 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Khdc3Q9CWU5 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Khdc3Q9CWU5 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC18.02■□□□□ 0.48
Khdc3Q9CWU5 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Khdc3Q9CWU5 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Khdc3Q9CWU5 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.02■□□□□ 0.47
Khdc3Q9CWU5 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Khdc3Q9CWU5 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Khdc3Q9CWU5 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Khdc3Q9CWU5 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Khdc3Q9CWU5 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Khdc3Q9CWU5 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Khdc3Q9CWU5 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Khdc3Q9CWU5 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Khdc3Q9CWU5 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Khdc3Q9CWU5 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC18.01■□□□□ 0.47
Khdc3Q9CWU5 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC18.01■□□□□ 0.47
Khdc3Q9CWU5 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Khdc3Q9CWU5 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Khdc3Q9CWU5 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Khdc3Q9CWU5 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Khdc3Q9CWU5 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Khdc3Q9CWU5 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Khdc3Q9CWU5 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Khdc3Q9CWU5 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Khdc3Q9CWU5 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Khdc3Q9CWU5 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Khdc3Q9CWU5 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Khdc3Q9CWU5 Gm14281-201ENSMUST00000121700 1294 ntBASIC18■□□□□ 0.47
Khdc3Q9CWU5 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
Khdc3Q9CWU5 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC18■□□□□ 0.47
Khdc3Q9CWU5 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18■□□□□ 0.47
Khdc3Q9CWU5 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC18■□□□□ 0.47
Khdc3Q9CWU5 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Khdc3Q9CWU5 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18■□□□□ 0.47
Khdc3Q9CWU5 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
Khdc3Q9CWU5 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Khdc3Q9CWU5 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Khdc3Q9CWU5 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Khdc3Q9CWU5 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18■□□□□ 0.47
Khdc3Q9CWU5 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Khdc3Q9CWU5 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Khdc3Q9CWU5 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Khdc3Q9CWU5 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.99■□□□□ 0.47
Khdc3Q9CWU5 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Khdc3Q9CWU5 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Khdc3Q9CWU5 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Khdc3Q9CWU5 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Khdc3Q9CWU5 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Khdc3Q9CWU5 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Khdc3Q9CWU5 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC17.99■□□□□ 0.47
Khdc3Q9CWU5 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Khdc3Q9CWU5 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Khdc3Q9CWU5 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.99■□□□□ 0.47
Khdc3Q9CWU5 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Khdc3Q9CWU5 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Khdc3Q9CWU5 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Khdc3Q9CWU5 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Khdc3Q9CWU5 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Khdc3Q9CWU5 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Khdc3Q9CWU5 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Khdc3Q9CWU5 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.98■□□□□ 0.47
Khdc3Q9CWU5 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Khdc3Q9CWU5 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Khdc3Q9CWU5 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Khdc3Q9CWU5 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Khdc3Q9CWU5 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Khdc3Q9CWU5 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.98■□□□□ 0.47
Khdc3Q9CWU5 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Khdc3Q9CWU5 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC17.98■□□□□ 0.47
Khdc3Q9CWU5 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Khdc3Q9CWU5 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC17.98■□□□□ 0.47
Khdc3Q9CWU5 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms