Protein–RNA interactions for Protein: Q99N57

Raf1, RAF proto-oncogene serine/threonine-protein kinase, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raf1Q99N57 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Raf1Q99N57 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Raf1Q99N57 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC16.83■□□□□ 0.28
Raf1Q99N57 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Raf1Q99N57 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Raf1Q99N57 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Raf1Q99N57 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Raf1Q99N57 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Raf1Q99N57 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Raf1Q99N57 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Raf1Q99N57 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC16.82■□□□□ 0.28
Raf1Q99N57 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Raf1Q99N57 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Raf1Q99N57 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Raf1Q99N57 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Raf1Q99N57 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Raf1Q99N57 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Raf1Q99N57 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Raf1Q99N57 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Raf1Q99N57 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Raf1Q99N57 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Raf1Q99N57 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Raf1Q99N57 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Raf1Q99N57 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Raf1Q99N57 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
Raf1Q99N57 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Raf1Q99N57 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC16.81■□□□□ 0.28
Raf1Q99N57 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Raf1Q99N57 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Raf1Q99N57 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Raf1Q99N57 Krt8-ps-201ENSMUST00000208495 945 ntBASIC16.81■□□□□ 0.28
Raf1Q99N57 Spcs1-207ENSMUST00000228767 1008 ntBASIC16.81■□□□□ 0.28
Raf1Q99N57 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Raf1Q99N57 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Raf1Q99N57 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Raf1Q99N57 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Raf1Q99N57 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Raf1Q99N57 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Raf1Q99N57 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Raf1Q99N57 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Raf1Q99N57 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Raf1Q99N57 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Raf1Q99N57 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Raf1Q99N57 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Raf1Q99N57 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Raf1Q99N57 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC16.8■□□□□ 0.28
Raf1Q99N57 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Raf1Q99N57 Gm5576-201ENSMUST00000075809 1236 ntBASIC16.8■□□□□ 0.28
Raf1Q99N57 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC16.8■□□□□ 0.28
Raf1Q99N57 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Raf1Q99N57 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Raf1Q99N57 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Raf1Q99N57 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Raf1Q99N57 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Raf1Q99N57 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Raf1Q99N57 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Raf1Q99N57 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Raf1Q99N57 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Raf1Q99N57 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Raf1Q99N57 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
Raf1Q99N57 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Raf1Q99N57 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Raf1Q99N57 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Raf1Q99N57 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Raf1Q99N57 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Raf1Q99N57 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
Raf1Q99N57 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Raf1Q99N57 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Raf1Q99N57 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Raf1Q99N57 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Raf1Q99N57 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Raf1Q99N57 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC16.79■□□□□ 0.28
Raf1Q99N57 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Raf1Q99N57 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Raf1Q99N57 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.78■□□□□ 0.28
Raf1Q99N57 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Raf1Q99N57 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Raf1Q99N57 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Raf1Q99N57 Gm10571-201ENSMUST00000097869 1638 ntBASIC16.78■□□□□ 0.28
Raf1Q99N57 Gm45141-201ENSMUST00000206502 1888 ntBASIC16.78■□□□□ 0.28
Raf1Q99N57 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Raf1Q99N57 Gm5953-201ENSMUST00000220644 2616 ntBASIC16.78■□□□□ 0.28
Raf1Q99N57 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Raf1Q99N57 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Raf1Q99N57 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Raf1Q99N57 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Raf1Q99N57 Wdr70-203ENSMUST00000227371 1130 ntBASIC16.78■□□□□ 0.28
Raf1Q99N57 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Raf1Q99N57 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Raf1Q99N57 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Raf1Q99N57 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Raf1Q99N57 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Raf1Q99N57 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Raf1Q99N57 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Raf1Q99N57 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Raf1Q99N57 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
Raf1Q99N57 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Raf1Q99N57 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC16.77■□□□□ 0.28
Raf1Q99N57 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
Raf1Q99N57 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms