Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.52■□□□□ 0.72
Lysmd3Q99LE3 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.52■□□□□ 0.72
Lysmd3Q99LE3 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Lysmd3Q99LE3 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Lysmd3Q99LE3 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Lysmd3Q99LE3 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Lysmd3Q99LE3 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Lysmd3Q99LE3 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Lysmd3Q99LE3 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Lysmd3Q99LE3 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Lysmd3Q99LE3 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lysmd3Q99LE3 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Lysmd3Q99LE3 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lysmd3Q99LE3 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lysmd3Q99LE3 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lysmd3Q99LE3 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
Lysmd3Q99LE3 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lysmd3Q99LE3 Gm13148-201ENSMUST00000118892 745 ntBASIC19.51■□□□□ 0.71
Lysmd3Q99LE3 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lysmd3Q99LE3 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.51■□□□□ 0.71
Lysmd3Q99LE3 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC19.51■□□□□ 0.71
Lysmd3Q99LE3 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC19.51■□□□□ 0.71
Lysmd3Q99LE3 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lysmd3Q99LE3 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Lysmd3Q99LE3 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Lysmd3Q99LE3 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Lysmd3Q99LE3 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Lysmd3Q99LE3 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lysmd3Q99LE3 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
Lysmd3Q99LE3 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lysmd3Q99LE3 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lysmd3Q99LE3 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC19.5■□□□□ 0.71
Lysmd3Q99LE3 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Lysmd3Q99LE3 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.5■□□□□ 0.71
Lysmd3Q99LE3 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lysmd3Q99LE3 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Lysmd3Q99LE3 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.5■□□□□ 0.71
Lysmd3Q99LE3 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lysmd3Q99LE3 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.5■□□□□ 0.71
Lysmd3Q99LE3 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lysmd3Q99LE3 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.49■□□□□ 0.71
Lysmd3Q99LE3 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Lysmd3Q99LE3 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Lysmd3Q99LE3 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Lysmd3Q99LE3 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Lysmd3Q99LE3 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Lysmd3Q99LE3 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Lysmd3Q99LE3 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Lysmd3Q99LE3 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Lysmd3Q99LE3 Gm6211-202ENSMUST00000167849 925 ntBASIC19.48■□□□□ 0.71
Lysmd3Q99LE3 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC19.48■□□□□ 0.71
Lysmd3Q99LE3 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Lysmd3Q99LE3 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Lysmd3Q99LE3 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Lysmd3Q99LE3 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Lysmd3Q99LE3 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Lysmd3Q99LE3 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Lysmd3Q99LE3 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.48■□□□□ 0.71
Lysmd3Q99LE3 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Lysmd3Q99LE3 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Lysmd3Q99LE3 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Lysmd3Q99LE3 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lysmd3Q99LE3 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lysmd3Q99LE3 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.47■□□□□ 0.71
Lysmd3Q99LE3 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Lysmd3Q99LE3 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lysmd3Q99LE3 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lysmd3Q99LE3 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Lysmd3Q99LE3 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lysmd3Q99LE3 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lysmd3Q99LE3 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lysmd3Q99LE3 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lysmd3Q99LE3 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Lysmd3Q99LE3 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Lysmd3Q99LE3 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lysmd3Q99LE3 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Lysmd3Q99LE3 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Lysmd3Q99LE3 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.46■□□□□ 0.71
Lysmd3Q99LE3 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC19.46■□□□□ 0.71
Lysmd3Q99LE3 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
Lysmd3Q99LE3 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lysmd3Q99LE3 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Lysmd3Q99LE3 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lysmd3Q99LE3 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lysmd3Q99LE3 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Lysmd3Q99LE3 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lysmd3Q99LE3 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
Lysmd3Q99LE3 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Lysmd3Q99LE3 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.45■□□□□ 0.7
Lysmd3Q99LE3 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Lysmd3Q99LE3 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lysmd3Q99LE3 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lysmd3Q99LE3 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lysmd3Q99LE3 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lysmd3Q99LE3 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lysmd3Q99LE3 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lysmd3Q99LE3 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.45■□□□□ 0.7
Lysmd3Q99LE3 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lysmd3Q99LE3 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Lysmd3Q99LE3 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms