Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Thumpd1Q99J36 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC16.78■□□□□ 0.28
Thumpd1Q99J36 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Thumpd1Q99J36 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Thumpd1Q99J36 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Thumpd1Q99J36 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Thumpd1Q99J36 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Thumpd1Q99J36 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Thumpd1Q99J36 Gm5522-201ENSMUST00000189483 1242 ntBASIC16.77■□□□□ 0.28
Thumpd1Q99J36 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Thumpd1Q99J36 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Thumpd1Q99J36 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.27
Thumpd1Q99J36 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Thumpd1Q99J36 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Thumpd1Q99J36 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Thumpd1Q99J36 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Thumpd1Q99J36 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Thumpd1Q99J36 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Thumpd1Q99J36 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Thumpd1Q99J36 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC16.76■□□□□ 0.27
Thumpd1Q99J36 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Thumpd1Q99J36 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Thumpd1Q99J36 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Thumpd1Q99J36 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Thumpd1Q99J36 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
Thumpd1Q99J36 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Thumpd1Q99J36 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Thumpd1Q99J36 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Thumpd1Q99J36 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Thumpd1Q99J36 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Thumpd1Q99J36 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Thumpd1Q99J36 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
Thumpd1Q99J36 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Thumpd1Q99J36 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Thumpd1Q99J36 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC16.75■□□□□ 0.27
Thumpd1Q99J36 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC16.75■□□□□ 0.27
Thumpd1Q99J36 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Thumpd1Q99J36 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Thumpd1Q99J36 Gm10209-201ENSMUST00000203397 1607 ntBASIC16.75■□□□□ 0.27
Thumpd1Q99J36 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Thumpd1Q99J36 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Thumpd1Q99J36 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC16.75■□□□□ 0.27
Thumpd1Q99J36 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC16.75■□□□□ 0.27
Thumpd1Q99J36 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC16.75■□□□□ 0.27
Thumpd1Q99J36 Dmtn-210ENSMUST00000228824 2377 ntBASIC16.75■□□□□ 0.27
Thumpd1Q99J36 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC16.75■□□□□ 0.27
Thumpd1Q99J36 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Thumpd1Q99J36 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Thumpd1Q99J36 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Thumpd1Q99J36 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Thumpd1Q99J36 AC123834.2-201ENSMUST00000224038 2340 ntBASIC16.74■□□□□ 0.27
Thumpd1Q99J36 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Thumpd1Q99J36 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Thumpd1Q99J36 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Thumpd1Q99J36 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Thumpd1Q99J36 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Thumpd1Q99J36 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Thumpd1Q99J36 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Thumpd1Q99J36 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Thumpd1Q99J36 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Thumpd1Q99J36 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Thumpd1Q99J36 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Thumpd1Q99J36 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Thumpd1Q99J36 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Thumpd1Q99J36 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Thumpd1Q99J36 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC16.73■□□□□ 0.27
Thumpd1Q99J36 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC16.73■□□□□ 0.27
Thumpd1Q99J36 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Thumpd1Q99J36 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Thumpd1Q99J36 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Thumpd1Q99J36 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Thumpd1Q99J36 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Thumpd1Q99J36 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Thumpd1Q99J36 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Thumpd1Q99J36 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Thumpd1Q99J36 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Thumpd1Q99J36 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
Thumpd1Q99J36 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Thumpd1Q99J36 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC16.72■□□□□ 0.27
Thumpd1Q99J36 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Thumpd1Q99J36 Gm43213-201ENSMUST00000151866 1790 ntBASIC16.72■□□□□ 0.27
Thumpd1Q99J36 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Thumpd1Q99J36 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Thumpd1Q99J36 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC16.72■□□□□ 0.27
Thumpd1Q99J36 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Thumpd1Q99J36 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Thumpd1Q99J36 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Thumpd1Q99J36 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Thumpd1Q99J36 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Thumpd1Q99J36 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Thumpd1Q99J36 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Thumpd1Q99J36 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Thumpd1Q99J36 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Thumpd1Q99J36 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Thumpd1Q99J36 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Thumpd1Q99J36 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Thumpd1Q99J36 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Thumpd1Q99J36 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Thumpd1Q99J36 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Thumpd1Q99J36 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms