Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
BBS4Q96RK4 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
BBS4Q96RK4 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
BBS4Q96RK4 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.2■□□□□ 0.82
BBS4Q96RK4 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
BBS4Q96RK4 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
BBS4Q96RK4 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
BBS4Q96RK4 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
BBS4Q96RK4 TSPY26P-201ENST00000476365 1326 ntBASIC20.2■□□□□ 0.82
BBS4Q96RK4 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
BBS4Q96RK4 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
BBS4Q96RK4 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
BBS4Q96RK4 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
BBS4Q96RK4 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.19■□□□□ 0.82
BBS4Q96RK4 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.19■□□□□ 0.82
BBS4Q96RK4 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
BBS4Q96RK4 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.19■□□□□ 0.82
BBS4Q96RK4 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.19■□□□□ 0.82
BBS4Q96RK4 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.19■□□□□ 0.82
BBS4Q96RK4 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
BBS4Q96RK4 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.19■□□□□ 0.82
BBS4Q96RK4 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
BBS4Q96RK4 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
BBS4Q96RK4 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.19■□□□□ 0.82
BBS4Q96RK4 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
BBS4Q96RK4 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
BBS4Q96RK4 RASA4CP-201ENST00000424092 1398 ntBASIC20.19■□□□□ 0.82
BBS4Q96RK4 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
BBS4Q96RK4 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.18■□□□□ 0.82
BBS4Q96RK4 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
BBS4Q96RK4 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
BBS4Q96RK4 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.18■□□□□ 0.82
BBS4Q96RK4 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
BBS4Q96RK4 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
BBS4Q96RK4 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
BBS4Q96RK4 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
BBS4Q96RK4 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
BBS4Q96RK4 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
BBS4Q96RK4 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
BBS4Q96RK4 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
BBS4Q96RK4 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
BBS4Q96RK4 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
BBS4Q96RK4 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
BBS4Q96RK4 MIR939-201ENST00000401314 82 ntBASIC20.18■□□□□ 0.82
BBS4Q96RK4 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.18■□□□□ 0.82
BBS4Q96RK4 SMUG1P1-201ENST00000590640 811 ntBASIC20.18■□□□□ 0.82
BBS4Q96RK4 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
BBS4Q96RK4 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
BBS4Q96RK4 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
BBS4Q96RK4 AC026471.6-201ENST00000622954 1905 ntBASIC20.17■□□□□ 0.82
BBS4Q96RK4 CLDN5-201ENST00000403084 2357 ntBASIC20.17■□□□□ 0.82
BBS4Q96RK4 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.17■□□□□ 0.82
BBS4Q96RK4 AC091305.1-201ENST00000479476 895 ntBASIC20.17■□□□□ 0.82
BBS4Q96RK4 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.17■□□□□ 0.82
BBS4Q96RK4 AC104564.3-201ENST00000582367 638 ntBASIC20.17■□□□□ 0.82
BBS4Q96RK4 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.17■□□□□ 0.82
BBS4Q96RK4 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
BBS4Q96RK4 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.17■□□□□ 0.82
BBS4Q96RK4 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
BBS4Q96RK4 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
BBS4Q96RK4 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
BBS4Q96RK4 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
BBS4Q96RK4 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
BBS4Q96RK4 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
BBS4Q96RK4 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
BBS4Q96RK4 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
BBS4Q96RK4 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
BBS4Q96RK4 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.16■□□□□ 0.82
BBS4Q96RK4 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
BBS4Q96RK4 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.16■□□□□ 0.82
BBS4Q96RK4 AL136967.2-201ENST00000623968 743 ntBASIC20.16■□□□□ 0.82
BBS4Q96RK4 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
BBS4Q96RK4 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
BBS4Q96RK4 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
BBS4Q96RK4 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
BBS4Q96RK4 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
BBS4Q96RK4 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
BBS4Q96RK4 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
BBS4Q96RK4 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
BBS4Q96RK4 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
BBS4Q96RK4 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
BBS4Q96RK4 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
BBS4Q96RK4 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
BBS4Q96RK4 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.15■□□□□ 0.82
BBS4Q96RK4 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
BBS4Q96RK4 AC244015.2-201ENST00000616358 1861 ntBASIC20.15■□□□□ 0.82
BBS4Q96RK4 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
BBS4Q96RK4 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
BBS4Q96RK4 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
BBS4Q96RK4 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
BBS4Q96RK4 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
BBS4Q96RK4 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
BBS4Q96RK4 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
BBS4Q96RK4 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
BBS4Q96RK4 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
BBS4Q96RK4 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
BBS4Q96RK4 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.14■□□□□ 0.81
BBS4Q96RK4 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
BBS4Q96RK4 AL031432.3-201ENST00000607698 485 ntBASIC20.14■□□□□ 0.81
BBS4Q96RK4 AC105233.4-201ENST00000642045 216 ntBASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms