Protein–RNA interactions for Protein: Q91UZ8

Pcdhb11, MCG141285, mousemouse

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb11Q91UZ8 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhb11Q91UZ8 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhb11Q91UZ8 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhb11Q91UZ8 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Pcdhb11Q91UZ8 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhb11Q91UZ8 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
Pcdhb11Q91UZ8 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhb11Q91UZ8 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhb11Q91UZ8 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhb11Q91UZ8 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.27■□□□□ 0.68
Pcdhb11Q91UZ8 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Pcdhb11Q91UZ8 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Pcdhb11Q91UZ8 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Pcdhb11Q91UZ8 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Pcdhb11Q91UZ8 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
Pcdhb11Q91UZ8 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb11Q91UZ8 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb11Q91UZ8 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb11Q91UZ8 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb11Q91UZ8 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Pcdhb11Q91UZ8 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.26■□□□□ 0.67
Pcdhb11Q91UZ8 AV356131-201ENSMUST00000206201 750 ntBASIC19.26■□□□□ 0.67
Pcdhb11Q91UZ8 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb11Q91UZ8 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb11Q91UZ8 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb11Q91UZ8 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Pcdhb11Q91UZ8 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb11Q91UZ8 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb11Q91UZ8 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb11Q91UZ8 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.25■□□□□ 0.67
Pcdhb11Q91UZ8 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb11Q91UZ8 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb11Q91UZ8 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.25■□□□□ 0.67
Pcdhb11Q91UZ8 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
Pcdhb11Q91UZ8 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb11Q91UZ8 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb11Q91UZ8 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC19.25■□□□□ 0.67
Pcdhb11Q91UZ8 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb11Q91UZ8 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb11Q91UZ8 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Pcdhb11Q91UZ8 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb11Q91UZ8 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb11Q91UZ8 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb11Q91UZ8 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb11Q91UZ8 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb11Q91UZ8 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb11Q91UZ8 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Pcdhb11Q91UZ8 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb11Q91UZ8 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.24■□□□□ 0.67
Pcdhb11Q91UZ8 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb11Q91UZ8 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb11Q91UZ8 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb11Q91UZ8 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.24■□□□□ 0.67
Pcdhb11Q91UZ8 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb11Q91UZ8 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb11Q91UZ8 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb11Q91UZ8 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb11Q91UZ8 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC19.23■□□□□ 0.67
Pcdhb11Q91UZ8 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb11Q91UZ8 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb11Q91UZ8 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb11Q91UZ8 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb11Q91UZ8 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb11Q91UZ8 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Pcdhb11Q91UZ8 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.23■□□□□ 0.67
Pcdhb11Q91UZ8 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.23■□□□□ 0.67
Pcdhb11Q91UZ8 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb11Q91UZ8 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb11Q91UZ8 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb11Q91UZ8 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb11Q91UZ8 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb11Q91UZ8 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhb11Q91UZ8 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Pcdhb11Q91UZ8 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhb11Q91UZ8 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhb11Q91UZ8 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhb11Q91UZ8 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhb11Q91UZ8 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhb11Q91UZ8 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhb11Q91UZ8 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhb11Q91UZ8 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhb11Q91UZ8 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhb11Q91UZ8 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhb11Q91UZ8 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhb11Q91UZ8 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Pcdhb11Q91UZ8 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhb11Q91UZ8 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Pcdhb11Q91UZ8 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Pcdhb11Q91UZ8 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhb11Q91UZ8 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhb11Q91UZ8 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhb11Q91UZ8 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Pcdhb11Q91UZ8 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhb11Q91UZ8 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Pcdhb11Q91UZ8 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhb11Q91UZ8 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.21■□□□□ 0.67
Pcdhb11Q91UZ8 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhb11Q91UZ8 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC19.21■□□□□ 0.67
Pcdhb11Q91UZ8 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC19.21■□□□□ 0.67
Pcdhb11Q91UZ8 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms