Protein–RNA interactions for Protein: Q8C7R7

Rfx6, DNA-binding protein RFX6, mousemouse

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx6Q8C7R7 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Rfx6Q8C7R7 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rfx6Q8C7R7 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Rfx6Q8C7R7 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rfx6Q8C7R7 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rfx6Q8C7R7 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
Rfx6Q8C7R7 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rfx6Q8C7R7 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.09■□□□□ 0.65
Rfx6Q8C7R7 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Rfx6Q8C7R7 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rfx6Q8C7R7 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Rfx6Q8C7R7 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Rfx6Q8C7R7 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rfx6Q8C7R7 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rfx6Q8C7R7 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Rfx6Q8C7R7 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rfx6Q8C7R7 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rfx6Q8C7R7 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rfx6Q8C7R7 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rfx6Q8C7R7 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Rfx6Q8C7R7 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC19.09■□□□□ 0.65
Rfx6Q8C7R7 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Rfx6Q8C7R7 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Rfx6Q8C7R7 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Rfx6Q8C7R7 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Rfx6Q8C7R7 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Rfx6Q8C7R7 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Rfx6Q8C7R7 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.65
Rfx6Q8C7R7 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Rfx6Q8C7R7 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Rfx6Q8C7R7 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.08■□□□□ 0.64
Rfx6Q8C7R7 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rfx6Q8C7R7 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC19.08■□□□□ 0.64
Rfx6Q8C7R7 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.08■□□□□ 0.64
Rfx6Q8C7R7 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rfx6Q8C7R7 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.08■□□□□ 0.64
Rfx6Q8C7R7 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Rfx6Q8C7R7 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Rfx6Q8C7R7 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rfx6Q8C7R7 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rfx6Q8C7R7 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.07■□□□□ 0.64
Rfx6Q8C7R7 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19.07■□□□□ 0.64
Rfx6Q8C7R7 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.07■□□□□ 0.64
Rfx6Q8C7R7 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rfx6Q8C7R7 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rfx6Q8C7R7 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rfx6Q8C7R7 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Rfx6Q8C7R7 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rfx6Q8C7R7 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
Rfx6Q8C7R7 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Rfx6Q8C7R7 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Rfx6Q8C7R7 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Rfx6Q8C7R7 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rfx6Q8C7R7 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rfx6Q8C7R7 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rfx6Q8C7R7 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rfx6Q8C7R7 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rfx6Q8C7R7 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Rfx6Q8C7R7 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.06■□□□□ 0.64
Rfx6Q8C7R7 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19.06■□□□□ 0.64
Rfx6Q8C7R7 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Rfx6Q8C7R7 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rfx6Q8C7R7 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rfx6Q8C7R7 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Rfx6Q8C7R7 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
Rfx6Q8C7R7 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rfx6Q8C7R7 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rfx6Q8C7R7 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rfx6Q8C7R7 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC19.05■□□□□ 0.64
Rfx6Q8C7R7 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Rfx6Q8C7R7 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Rfx6Q8C7R7 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.05■□□□□ 0.64
Rfx6Q8C7R7 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Rfx6Q8C7R7 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rfx6Q8C7R7 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.05■□□□□ 0.64
Rfx6Q8C7R7 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.05■□□□□ 0.64
Rfx6Q8C7R7 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Rfx6Q8C7R7 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
Rfx6Q8C7R7 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rfx6Q8C7R7 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rfx6Q8C7R7 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rfx6Q8C7R7 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rfx6Q8C7R7 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Rfx6Q8C7R7 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rfx6Q8C7R7 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
Rfx6Q8C7R7 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rfx6Q8C7R7 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rfx6Q8C7R7 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Rfx6Q8C7R7 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Rfx6Q8C7R7 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Rfx6Q8C7R7 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rfx6Q8C7R7 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Rfx6Q8C7R7 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rfx6Q8C7R7 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rfx6Q8C7R7 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Rfx6Q8C7R7 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rfx6Q8C7R7 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.03■□□□□ 0.64
Rfx6Q8C7R7 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rfx6Q8C7R7 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Rfx6Q8C7R7 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms