Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cpne3Q8BT60 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Cpne3Q8BT60 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cpne3Q8BT60 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cpne3Q8BT60 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cpne3Q8BT60 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cpne3Q8BT60 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cpne3Q8BT60 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Cpne3Q8BT60 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Cpne3Q8BT60 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cpne3Q8BT60 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cpne3Q8BT60 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cpne3Q8BT60 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.13■□□□□ 0.49
Cpne3Q8BT60 Gm12821-201ENSMUST00000120022 600 ntBASIC18.13■□□□□ 0.49
Cpne3Q8BT60 Gm11421-201ENSMUST00000122124 294 ntBASIC18.13■□□□□ 0.49
Cpne3Q8BT60 Gm8493-201ENSMUST00000196881 489 ntBASIC18.13■□□□□ 0.49
Cpne3Q8BT60 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cpne3Q8BT60 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cpne3Q8BT60 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cpne3Q8BT60 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cpne3Q8BT60 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Cpne3Q8BT60 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cpne3Q8BT60 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.12■□□□□ 0.49
Cpne3Q8BT60 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cpne3Q8BT60 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Cpne3Q8BT60 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Cpne3Q8BT60 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
Cpne3Q8BT60 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cpne3Q8BT60 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cpne3Q8BT60 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.12■□□□□ 0.49
Cpne3Q8BT60 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC18.12■□□□□ 0.49
Cpne3Q8BT60 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Cpne3Q8BT60 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cpne3Q8BT60 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cpne3Q8BT60 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cpne3Q8BT60 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.12■□□□□ 0.49
Cpne3Q8BT60 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cpne3Q8BT60 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cpne3Q8BT60 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cpne3Q8BT60 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cpne3Q8BT60 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cpne3Q8BT60 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cpne3Q8BT60 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cpne3Q8BT60 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cpne3Q8BT60 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cpne3Q8BT60 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Cpne3Q8BT60 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
Cpne3Q8BT60 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cpne3Q8BT60 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
Cpne3Q8BT60 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC18.11■□□□□ 0.49
Cpne3Q8BT60 Appbp2os-202ENSMUST00000206972 447 ntBASIC18.11■□□□□ 0.49
Cpne3Q8BT60 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC18.11■□□□□ 0.49
Cpne3Q8BT60 Wdr70-203ENSMUST00000227371 1130 ntBASIC18.11■□□□□ 0.49
Cpne3Q8BT60 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cpne3Q8BT60 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cpne3Q8BT60 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Cpne3Q8BT60 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cpne3Q8BT60 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Cpne3Q8BT60 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cpne3Q8BT60 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cpne3Q8BT60 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cpne3Q8BT60 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cpne3Q8BT60 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
Cpne3Q8BT60 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cpne3Q8BT60 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cpne3Q8BT60 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cpne3Q8BT60 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cpne3Q8BT60 Smad6-203ENSMUST00000179458 273 ntBASIC18.1■□□□□ 0.49
Cpne3Q8BT60 Gm27454-201ENSMUST00000185090 204 ntBASIC18.1■□□□□ 0.49
Cpne3Q8BT60 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cpne3Q8BT60 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cpne3Q8BT60 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cpne3Q8BT60 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cpne3Q8BT60 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cpne3Q8BT60 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cpne3Q8BT60 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Cpne3Q8BT60 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
Cpne3Q8BT60 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cpne3Q8BT60 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cpne3Q8BT60 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cpne3Q8BT60 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC18.09■□□□□ 0.49
Cpne3Q8BT60 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cpne3Q8BT60 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cpne3Q8BT60 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cpne3Q8BT60 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cpne3Q8BT60 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Cpne3Q8BT60 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Cpne3Q8BT60 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cpne3Q8BT60 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cpne3Q8BT60 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cpne3Q8BT60 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cpne3Q8BT60 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cpne3Q8BT60 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cpne3Q8BT60 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cpne3Q8BT60 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Cpne3Q8BT60 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cpne3Q8BT60 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cpne3Q8BT60 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC18.08■□□□□ 0.48
Cpne3Q8BT60 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Cpne3Q8BT60 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms