Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sfr1Q8BP27 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sfr1Q8BP27 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sfr1Q8BP27 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Sfr1Q8BP27 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sfr1Q8BP27 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sfr1Q8BP27 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sfr1Q8BP27 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Sfr1Q8BP27 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Sfr1Q8BP27 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sfr1Q8BP27 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sfr1Q8BP27 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.05■□□□□ 0.64
Sfr1Q8BP27 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Sfr1Q8BP27 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sfr1Q8BP27 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sfr1Q8BP27 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.04■□□□□ 0.64
Sfr1Q8BP27 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.04■□□□□ 0.64
Sfr1Q8BP27 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Sfr1Q8BP27 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Sfr1Q8BP27 Gm27405-201ENSMUST00000184201 112 ntBASIC19.04■□□□□ 0.64
Sfr1Q8BP27 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Sfr1Q8BP27 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC19.04■□□□□ 0.64
Sfr1Q8BP27 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sfr1Q8BP27 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Sfr1Q8BP27 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sfr1Q8BP27 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sfr1Q8BP27 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sfr1Q8BP27 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sfr1Q8BP27 Gm13534-201ENSMUST00000121169 513 ntBASIC19.03■□□□□ 0.64
Sfr1Q8BP27 Gm7514-201ENSMUST00000209475 934 ntBASIC19.03■□□□□ 0.64
Sfr1Q8BP27 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Sfr1Q8BP27 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.03■□□□□ 0.64
Sfr1Q8BP27 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sfr1Q8BP27 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sfr1Q8BP27 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Sfr1Q8BP27 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Sfr1Q8BP27 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.03■□□□□ 0.64
Sfr1Q8BP27 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sfr1Q8BP27 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sfr1Q8BP27 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Sfr1Q8BP27 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sfr1Q8BP27 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Sfr1Q8BP27 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sfr1Q8BP27 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC19.02■□□□□ 0.64
Sfr1Q8BP27 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Sfr1Q8BP27 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC19.02■□□□□ 0.64
Sfr1Q8BP27 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC19.02■□□□□ 0.64
Sfr1Q8BP27 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sfr1Q8BP27 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Sfr1Q8BP27 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.02■□□□□ 0.63
Sfr1Q8BP27 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Sfr1Q8BP27 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Sfr1Q8BP27 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sfr1Q8BP27 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Sfr1Q8BP27 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sfr1Q8BP27 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sfr1Q8BP27 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sfr1Q8BP27 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sfr1Q8BP27 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.01■□□□□ 0.63
Sfr1Q8BP27 Gm7291-201ENSMUST00000199147 382 ntBASIC19.01■□□□□ 0.63
Sfr1Q8BP27 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.01■□□□□ 0.63
Sfr1Q8BP27 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sfr1Q8BP27 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Sfr1Q8BP27 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sfr1Q8BP27 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Sfr1Q8BP27 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19■□□□□ 0.63
Sfr1Q8BP27 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Sfr1Q8BP27 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sfr1Q8BP27 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19■□□□□ 0.63
Sfr1Q8BP27 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sfr1Q8BP27 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sfr1Q8BP27 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Sfr1Q8BP27 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19■□□□□ 0.63
Sfr1Q8BP27 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sfr1Q8BP27 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.99■□□□□ 0.63
Sfr1Q8BP27 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sfr1Q8BP27 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sfr1Q8BP27 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sfr1Q8BP27 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sfr1Q8BP27 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Sfr1Q8BP27 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sfr1Q8BP27 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Sfr1Q8BP27 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.99■□□□□ 0.63
Sfr1Q8BP27 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.99■□□□□ 0.63
Sfr1Q8BP27 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Sfr1Q8BP27 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sfr1Q8BP27 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Sfr1Q8BP27 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
Sfr1Q8BP27 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Sfr1Q8BP27 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Sfr1Q8BP27 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sfr1Q8BP27 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sfr1Q8BP27 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sfr1Q8BP27 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Sfr1Q8BP27 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.98■□□□□ 0.63
Sfr1Q8BP27 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sfr1Q8BP27 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Sfr1Q8BP27 Slc35b2-207ENSMUST00000226086 850 ntBASIC18.98■□□□□ 0.63
Sfr1Q8BP27 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sfr1Q8BP27 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms