Protein–RNA interactions for Protein: Q8BFX1

Rnf187, E3 ubiquitin-protein ligase RNF187, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf187Q8BFX1 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rnf187Q8BFX1 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rnf187Q8BFX1 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rnf187Q8BFX1 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Rnf187Q8BFX1 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rnf187Q8BFX1 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rnf187Q8BFX1 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Rnf187Q8BFX1 Spcs1-204ENSMUST00000226782 949 ntBASIC20.18■□□□□ 0.82
Rnf187Q8BFX1 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rnf187Q8BFX1 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rnf187Q8BFX1 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rnf187Q8BFX1 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
Rnf187Q8BFX1 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rnf187Q8BFX1 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rnf187Q8BFX1 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rnf187Q8BFX1 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Rnf187Q8BFX1 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Rnf187Q8BFX1 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rnf187Q8BFX1 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rnf187Q8BFX1 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Rnf187Q8BFX1 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rnf187Q8BFX1 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rnf187Q8BFX1 Gm35558-201ENSMUST00000222675 2219 ntBASIC20.17■□□□□ 0.82
Rnf187Q8BFX1 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rnf187Q8BFX1 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Rnf187Q8BFX1 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Rnf187Q8BFX1 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Rnf187Q8BFX1 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Rnf187Q8BFX1 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.17■□□□□ 0.82
Rnf187Q8BFX1 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC20.17■□□□□ 0.82
Rnf187Q8BFX1 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rnf187Q8BFX1 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Rnf187Q8BFX1 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
Rnf187Q8BFX1 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Rnf187Q8BFX1 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rnf187Q8BFX1 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC20.16■□□□□ 0.82
Rnf187Q8BFX1 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rnf187Q8BFX1 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rnf187Q8BFX1 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rnf187Q8BFX1 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
Rnf187Q8BFX1 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.15■□□□□ 0.82
Rnf187Q8BFX1 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rnf187Q8BFX1 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
Rnf187Q8BFX1 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Rnf187Q8BFX1 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.15■□□□□ 0.82
Rnf187Q8BFX1 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.15■□□□□ 0.82
Rnf187Q8BFX1 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rnf187Q8BFX1 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rnf187Q8BFX1 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rnf187Q8BFX1 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rnf187Q8BFX1 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Rnf187Q8BFX1 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rnf187Q8BFX1 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
Rnf187Q8BFX1 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Rnf187Q8BFX1 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.82
Rnf187Q8BFX1 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rnf187Q8BFX1 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC20.14■□□□□ 0.81
Rnf187Q8BFX1 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC20.14■□□□□ 0.81
Rnf187Q8BFX1 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Rnf187Q8BFX1 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rnf187Q8BFX1 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rnf187Q8BFX1 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Rnf187Q8BFX1 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Rnf187Q8BFX1 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Rnf187Q8BFX1 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rnf187Q8BFX1 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rnf187Q8BFX1 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rnf187Q8BFX1 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Rnf187Q8BFX1 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rnf187Q8BFX1 Shroom3-211ENSMUST00000225438 5742 ntBASIC20.13■□□□□ 0.81
Rnf187Q8BFX1 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rnf187Q8BFX1 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rnf187Q8BFX1 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC20.13■□□□□ 0.81
Rnf187Q8BFX1 AC126028.2-201ENSMUST00000228100 1833 ntBASIC20.13■□□□□ 0.81
Rnf187Q8BFX1 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Rnf187Q8BFX1 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
Rnf187Q8BFX1 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rnf187Q8BFX1 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Rnf187Q8BFX1 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Rnf187Q8BFX1 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rnf187Q8BFX1 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Rnf187Q8BFX1 Gm27454-201ENSMUST00000185090 204 ntBASIC20.12■□□□□ 0.81
Rnf187Q8BFX1 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.12■□□□□ 0.81
Rnf187Q8BFX1 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Rnf187Q8BFX1 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Rnf187Q8BFX1 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rnf187Q8BFX1 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rnf187Q8BFX1 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rnf187Q8BFX1 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rnf187Q8BFX1 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.11■□□□□ 0.81
Rnf187Q8BFX1 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rnf187Q8BFX1 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.11■□□□□ 0.81
Rnf187Q8BFX1 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rnf187Q8BFX1 Grk6-206ENSMUST00000224995 2971 ntBASIC20.11■□□□□ 0.81
Rnf187Q8BFX1 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Rnf187Q8BFX1 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rnf187Q8BFX1 AA386476-201ENSMUST00000098781 1665 ntBASIC20.11■□□□□ 0.81
Rnf187Q8BFX1 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Rnf187Q8BFX1 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Rnf187Q8BFX1 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 87.2 ms