Protein–RNA interactions for Protein: Q62147

Sspn, Sarcospan, mousemouse

Predictions only

Length 216 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SspnQ62147 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SspnQ62147 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SspnQ62147 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SspnQ62147 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SspnQ62147 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SspnQ62147 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
SspnQ62147 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
SspnQ62147 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
SspnQ62147 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SspnQ62147 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SspnQ62147 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SspnQ62147 AC126028.2-201ENSMUST00000228100 1833 ntBASIC15.69■□□□□ 0.1
SspnQ62147 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
SspnQ62147 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC15.69■□□□□ 0.1
SspnQ62147 Gm11421-201ENSMUST00000122124 294 ntBASIC15.69■□□□□ 0.1
SspnQ62147 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC15.69■□□□□ 0.1
SspnQ62147 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SspnQ62147 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
SspnQ62147 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SspnQ62147 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SspnQ62147 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SspnQ62147 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC15.69■□□□□ 0.1
SspnQ62147 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SspnQ62147 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SspnQ62147 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SspnQ62147 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
SspnQ62147 Gm37352-201ENSMUST00000193908 2181 ntBASIC15.69■□□□□ 0.1
SspnQ62147 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SspnQ62147 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
SspnQ62147 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SspnQ62147 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SspnQ62147 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SspnQ62147 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SspnQ62147 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SspnQ62147 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
SspnQ62147 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
SspnQ62147 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC15.68■□□□□ 0.1
SspnQ62147 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SspnQ62147 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SspnQ62147 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
SspnQ62147 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SspnQ62147 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SspnQ62147 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC15.68■□□□□ 0.1
SspnQ62147 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
SspnQ62147 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC15.68■□□□□ 0.1
SspnQ62147 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC15.68■□□□□ 0.1
SspnQ62147 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SspnQ62147 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SspnQ62147 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SspnQ62147 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SspnQ62147 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SspnQ62147 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SspnQ62147 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC15.67■□□□□ 0.1
SspnQ62147 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SspnQ62147 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SspnQ62147 Gm27454-201ENSMUST00000185090 204 ntBASIC15.67■□□□□ 0.1
SspnQ62147 AC137127.1-201ENSMUST00000213466 1078 ntBASIC15.67■□□□□ 0.1
SspnQ62147 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SspnQ62147 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SspnQ62147 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SspnQ62147 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SspnQ62147 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SspnQ62147 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SspnQ62147 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
SspnQ62147 Gm5784-201ENSMUST00000179344 2478 ntBASIC15.66■□□□□ 0.1
SspnQ62147 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
SspnQ62147 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
SspnQ62147 Wdr70-203ENSMUST00000227371 1130 ntBASIC15.66■□□□□ 0.1
SspnQ62147 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SspnQ62147 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
SspnQ62147 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
SspnQ62147 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SspnQ62147 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SspnQ62147 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
SspnQ62147 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
SspnQ62147 Gm18688-201ENSMUST00000204695 1859 ntBASIC15.65■□□□□ 0.1
SspnQ62147 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SspnQ62147 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SspnQ62147 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SspnQ62147 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SspnQ62147 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SspnQ62147 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SspnQ62147 Smad6-203ENSMUST00000179458 273 ntBASIC15.65■□□□□ 0.1
SspnQ62147 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SspnQ62147 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC15.65■□□□□ 0.1
SspnQ62147 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SspnQ62147 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SspnQ62147 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SspnQ62147 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SspnQ62147 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
SspnQ62147 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SspnQ62147 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SspnQ62147 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC15.64■□□□□ 0.1
SspnQ62147 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
SspnQ62147 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SspnQ62147 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
SspnQ62147 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SspnQ62147 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SspnQ62147 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SspnQ62147 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms