Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6d-4Q5R1I0 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6d-4Q5R1I0 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6d-4Q5R1I0 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6d-4Q5R1I0 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC15.81■□□□□ 0.12
Trav6d-4Q5R1I0 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC15.81■□□□□ 0.12
Trav6d-4Q5R1I0 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC15.81■□□□□ 0.12
Trav6d-4Q5R1I0 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Trav6d-4Q5R1I0 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav6d-4Q5R1I0 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trav6d-4Q5R1I0 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC15.81■□□□□ 0.12
Trav6d-4Q5R1I0 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Trav6d-4Q5R1I0 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC15.81■□□□□ 0.12
Trav6d-4Q5R1I0 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav6d-4Q5R1I0 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav6d-4Q5R1I0 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav6d-4Q5R1I0 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav6d-4Q5R1I0 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav6d-4Q5R1I0 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Trav6d-4Q5R1I0 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC15.81■□□□□ 0.12
Trav6d-4Q5R1I0 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav6d-4Q5R1I0 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav6d-4Q5R1I0 Gm20634-201ENSMUST00000090779 2956 ntBASIC15.81■□□□□ 0.12
Trav6d-4Q5R1I0 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC15.81■□□□□ 0.12
Trav6d-4Q5R1I0 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trav6d-4Q5R1I0 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav6d-4Q5R1I0 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trav6d-4Q5R1I0 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav6d-4Q5R1I0 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav6d-4Q5R1I0 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav6d-4Q5R1I0 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav6d-4Q5R1I0 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
Trav6d-4Q5R1I0 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC15.8■□□□□ 0.12
Trav6d-4Q5R1I0 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav6d-4Q5R1I0 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav6d-4Q5R1I0 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav6d-4Q5R1I0 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav6d-4Q5R1I0 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trav6d-4Q5R1I0 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trav6d-4Q5R1I0 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Trav6d-4Q5R1I0 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav6d-4Q5R1I0 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC15.79■□□□□ 0.12
Trav6d-4Q5R1I0 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav6d-4Q5R1I0 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav6d-4Q5R1I0 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC15.79■□□□□ 0.12
Trav6d-4Q5R1I0 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav6d-4Q5R1I0 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav6d-4Q5R1I0 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav6d-4Q5R1I0 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav6d-4Q5R1I0 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Trav6d-4Q5R1I0 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav6d-4Q5R1I0 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trav6d-4Q5R1I0 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav6d-4Q5R1I0 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Trav6d-4Q5R1I0 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav6d-4Q5R1I0 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav6d-4Q5R1I0 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav6d-4Q5R1I0 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav6d-4Q5R1I0 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav6d-4Q5R1I0 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
Trav6d-4Q5R1I0 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC15.78■□□□□ 0.12
Trav6d-4Q5R1I0 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Trav6d-4Q5R1I0 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav6d-4Q5R1I0 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav6d-4Q5R1I0 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC15.78■□□□□ 0.12
Trav6d-4Q5R1I0 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
Trav6d-4Q5R1I0 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trav6d-4Q5R1I0 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav6d-4Q5R1I0 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav6d-4Q5R1I0 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC15.77■□□□□ 0.12
Trav6d-4Q5R1I0 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trav6d-4Q5R1I0 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav6d-4Q5R1I0 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Trav6d-4Q5R1I0 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav6d-4Q5R1I0 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trav6d-4Q5R1I0 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Trav6d-4Q5R1I0 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav6d-4Q5R1I0 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC15.77■□□□□ 0.12
Trav6d-4Q5R1I0 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav6d-4Q5R1I0 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Trav6d-4Q5R1I0 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav6d-4Q5R1I0 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav6d-4Q5R1I0 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav6d-4Q5R1I0 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trav6d-4Q5R1I0 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav6d-4Q5R1I0 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Trav6d-4Q5R1I0 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav6d-4Q5R1I0 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav6d-4Q5R1I0 Gm13148-201ENSMUST00000118892 745 ntBASIC15.76■□□□□ 0.11
Trav6d-4Q5R1I0 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Trav6d-4Q5R1I0 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC15.76■□□□□ 0.11
Trav6d-4Q5R1I0 Gm6211-202ENSMUST00000167849 925 ntBASIC15.76■□□□□ 0.11
Trav6d-4Q5R1I0 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC15.76■□□□□ 0.11
Trav6d-4Q5R1I0 Gm3807-201ENSMUST00000193520 1168 ntBASIC15.76■□□□□ 0.11
Trav6d-4Q5R1I0 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
Trav6d-4Q5R1I0 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC15.76■□□□□ 0.11
Trav6d-4Q5R1I0 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC15.76■□□□□ 0.11
Trav6d-4Q5R1I0 CT025689.6-201ENSMUST00000224991 1104 ntBASIC15.76■□□□□ 0.11
Trav6d-4Q5R1I0 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Trav6d-4Q5R1I0 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms