Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
HIST1H1AQ02539 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
HIST1H1AQ02539 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HIST1H1AQ02539 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
HIST1H1AQ02539 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC16.24■□□□□ 0.19
HIST1H1AQ02539 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HIST1H1AQ02539 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HIST1H1AQ02539 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
HIST1H1AQ02539 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
HIST1H1AQ02539 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HIST1H1AQ02539 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
HIST1H1AQ02539 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HIST1H1AQ02539 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC16.23■□□□□ 0.19
HIST1H1AQ02539 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HIST1H1AQ02539 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC16.23■□□□□ 0.19
HIST1H1AQ02539 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC16.23■□□□□ 0.19
HIST1H1AQ02539 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HIST1H1AQ02539 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
HIST1H1AQ02539 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
HIST1H1AQ02539 RASSF1-AS1-201ENST00000629828 790 ntBASIC16.23■□□□□ 0.19
HIST1H1AQ02539 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HIST1H1AQ02539 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HIST1H1AQ02539 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
HIST1H1AQ02539 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC16.23■□□□□ 0.19
HIST1H1AQ02539 AC010542.4-201ENST00000563151 1910 ntBASIC16.23■□□□□ 0.19
HIST1H1AQ02539 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC16.23■□□□□ 0.19
HIST1H1AQ02539 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
HIST1H1AQ02539 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HIST1H1AQ02539 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HIST1H1AQ02539 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC16.22■□□□□ 0.19
HIST1H1AQ02539 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
HIST1H1AQ02539 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
HIST1H1AQ02539 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC16.22■□□□□ 0.19
HIST1H1AQ02539 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC16.22■□□□□ 0.19
HIST1H1AQ02539 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC16.22■□□□□ 0.19
HIST1H1AQ02539 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC16.22■□□□□ 0.19
HIST1H1AQ02539 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC16.22■□□□□ 0.19
HIST1H1AQ02539 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
HIST1H1AQ02539 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
HIST1H1AQ02539 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC16.22■□□□□ 0.19
HIST1H1AQ02539 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HIST1H1AQ02539 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
HIST1H1AQ02539 FAM99A-202ENST00000538190 1989 ntBASIC16.22■□□□□ 0.19
HIST1H1AQ02539 AIRN-201ENST00000601203 4374 ntBASIC16.22■□□□□ 0.19
HIST1H1AQ02539 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HIST1H1AQ02539 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC16.21■□□□□ 0.19
HIST1H1AQ02539 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC16.21■□□□□ 0.19
HIST1H1AQ02539 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC16.21■□□□□ 0.19
HIST1H1AQ02539 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HIST1H1AQ02539 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC16.21■□□□□ 0.19
HIST1H1AQ02539 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC16.21■□□□□ 0.19
HIST1H1AQ02539 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HIST1H1AQ02539 MIR3181-201ENST00000578512 73 ntBASIC16.21■□□□□ 0.19
HIST1H1AQ02539 TRIR-202ENST00000588213 841 ntTSL 3 BASIC16.21■□□□□ 0.19
HIST1H1AQ02539 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
HIST1H1AQ02539 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC16.21■□□□□ 0.19
HIST1H1AQ02539 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
HIST1H1AQ02539 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HIST1H1AQ02539 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
HIST1H1AQ02539 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC16.2■□□□□ 0.18
HIST1H1AQ02539 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC16.2■□□□□ 0.18
HIST1H1AQ02539 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC16.2■□□□□ 0.18
HIST1H1AQ02539 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC16.2■□□□□ 0.18
HIST1H1AQ02539 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
HIST1H1AQ02539 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC16.2■□□□□ 0.18
HIST1H1AQ02539 AC026310.3-201ENST00000625186 2373 ntBASIC16.2■□□□□ 0.18
HIST1H1AQ02539 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
HIST1H1AQ02539 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HIST1H1AQ02539 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HIST1H1AQ02539 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC16.2■□□□□ 0.18
HIST1H1AQ02539 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HIST1H1AQ02539 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HIST1H1AQ02539 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
HIST1H1AQ02539 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC16.2■□□□□ 0.18
HIST1H1AQ02539 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HIST1H1AQ02539 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
HIST1H1AQ02539 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HIST1H1AQ02539 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
HIST1H1AQ02539 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HIST1H1AQ02539 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HIST1H1AQ02539 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HIST1H1AQ02539 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HIST1H1AQ02539 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HIST1H1AQ02539 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HIST1H1AQ02539 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HIST1H1AQ02539 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HIST1H1AQ02539 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HIST1H1AQ02539 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HIST1H1AQ02539 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC16.19■□□□□ 0.18
HIST1H1AQ02539 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC16.19■□□□□ 0.18
HIST1H1AQ02539 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HIST1H1AQ02539 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC16.19■□□□□ 0.18
HIST1H1AQ02539 RPP21-222ENST00000433076 577 ntTSL 2 BASIC16.19■□□□□ 0.18
HIST1H1AQ02539 QDPR-206ENST00000508623 601 ntTSL 3 BASIC16.19■□□□□ 0.18
HIST1H1AQ02539 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC16.19■□□□□ 0.18
HIST1H1AQ02539 AL512631.2-201ENST00000604634 923 ntBASIC16.19■□□□□ 0.18
HIST1H1AQ02539 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HIST1H1AQ02539 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HIST1H1AQ02539 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC16.19■□□□□ 0.18
HIST1H1AQ02539 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms